Commit graph

88 commits

Author SHA1 Message Date
Junio C Hamano e5eac57356 Merge branch 'ab/commit-graph-write-progress'
The codepath to show progress meter while writing out commit-graph
file has been improved.

* ab/commit-graph-write-progress:
  commit-graph write: emit a percentage for all progress
  commit-graph write: add itermediate progress
  commit-graph write: remove empty line for readability
  commit-graph write: add more descriptive progress output
  commit-graph write: show progress for object search
  commit-graph write: more descriptive "writing out" output
  commit-graph write: add "Writing out" progress output
  commit-graph: don't call write_graph_chunk_extra_edges() unnecessarily
  commit-graph: rename "large edges" to "extra edges"
2019-02-05 14:26:14 -08:00
Junio C Hamano 04d67b6ab2 Merge branch 'ab/commit-graph-write-optim'
The codepath to write out commit-graph has been optimized by
following the usual pattern of visiting objects in in-pack order.

* ab/commit-graph-write-optim:
  commit-graph write: use pack order when finding commits
2019-02-05 14:26:14 -08:00
Junio C Hamano 19a504d92b Merge branch 'js/commit-graph-chunk-table-fix'
The codepath to read from the commit-graph file attempted to read
past the end of it when the file's table-of-contents was corrupt.

* js/commit-graph-chunk-table-fix:
  Makefile: correct example fuzz build
  commit-graph: fix buffer read-overflow
  commit-graph, fuzz: add fuzzer for commit-graph
2019-02-05 14:26:11 -08:00
Junio C Hamano b99a579f8e Merge branch 'sb/more-repo-in-api'
The in-core repository instances are passed through more codepaths.

* sb/more-repo-in-api: (23 commits)
  t/helper/test-repository: celebrate independence from the_repository
  path.h: make REPO_GIT_PATH_FUNC repository agnostic
  commit: prepare free_commit_buffer and release_commit_memory for any repo
  commit-graph: convert remaining functions to handle any repo
  submodule: don't add submodule as odb for push
  submodule: use submodule repos for object lookup
  pretty: prepare format_commit_message to handle arbitrary repositories
  commit: prepare logmsg_reencode to handle arbitrary repositories
  commit: prepare repo_unuse_commit_buffer to handle any repo
  commit: prepare get_commit_buffer to handle any repo
  commit-reach: prepare in_merge_bases[_many] to handle any repo
  commit-reach: prepare get_merge_bases to handle any repo
  commit-reach.c: allow get_merge_bases_many_0 to handle any repo
  commit-reach.c: allow remove_redundant to handle any repo
  commit-reach.c: allow merge_bases_many to handle any repo
  commit-reach.c: allow paint_down_to_common to handle any repo
  commit: allow parse_commit* to handle any repo
  object: parse_object to honor its repository argument
  object-store: prepare has_{sha1, object}_file to handle any repo
  object-store: prepare read_object_file to deal with any repo
  ...
2019-02-05 14:26:09 -08:00
Junio C Hamano 33e4ae9c50 Merge branch 'bc/sha-256'
Add sha-256 hash and plug it through the code to allow building Git
with the "NewHash".

* bc/sha-256:
  hash: add an SHA-256 implementation using OpenSSL
  sha256: add an SHA-256 implementation using libgcrypt
  Add a base implementation of SHA-256 support
  commit-graph: convert to using the_hash_algo
  t/helper: add a test helper to compute hash speed
  sha1-file: add a constant for hash block size
  t: make the sha1 test-tool helper generic
  t: add basic tests for our SHA-1 implementation
  cache: make hashcmp and hasheq work with larger hashes
  hex: introduce functions to print arbitrary hashes
  sha1-file: provide functions to look up hash algorithms
  sha1-file: rename algorithm to "sha1"
2019-01-29 12:47:55 -08:00
Ævar Arnfjörð Bjarmason 49bbc57a57 commit-graph write: emit a percentage for all progress
Follow-up 01ca387774 ("commit-graph: split up close_reachable()
progress output", 2018-11-19) by making the progress bars in
close_reachable() report a completion percentage. This fixes the last
occurrence where in the commit graph writing where we didn't report
that.

The change in 01ca387774 split up the 1x progress bar in
close_reachable() into 3x, but left them as dumb counters without a
percentage completion. Fixing that is easy, and the only reason it
wasn't done already is because that commit was rushed in during the
v2.20.0 RC period to fix the unrelated issue of over-reporting commit
numbers. See [1] and follow-ups for ML activity at the time and [2]
for an alternative approach where the progress bars weren't split up.

Now for e.g. linux.git we'll emit:

    $ ~/g/git/git --exec-path=$HOME/g/git commit-graph write
    Finding commits for commit graph among packed objects: 100% (6529159/6529159), done.
    Expanding reachable commits in commit graph: 100% (815990/815980), done.
    Computing commit graph generation numbers: 100% (815983/815983), done.
    Writing out commit graph in 4 passes: 100% (3263932/3263932), done.

1. https://public-inbox.org/git/20181119202300.18670-1-avarab@gmail.com/
2. https://public-inbox.org/git/20181122153922.16912-11-avarab@gmail.com/

Signed-off-by: Ævar Arnfjörð Bjarmason <avarab@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2019-01-23 13:14:08 -08:00
Ævar Arnfjörð Bjarmason 890226ccb5 commit-graph write: add itermediate progress
Add progress output to sections of code between "Annotating[...]" and
"Computing[...]generation numbers". This can collectively take 5-10
seconds on a large enough repository.

On a test repository with I have with ~7 million commits and ~50
million objects we'll now emit:

    $ ~/g/git/git --exec-path=$HOME/g/git commit-graph write
    Finding commits for commit graph among packed objects: 100% (124763727/124763727), done.
    Loading known commits in commit graph: 100% (18989461/18989461), done.
    Expanding reachable commits in commit graph: 100% (18989507/18989461), done.
    Clearing commit marks in commit graph: 100% (18989507/18989507), done.
    Counting distinct commits in commit graph: 100% (18989507/18989507), done.
    Finding extra edges in commit graph: 100% (18989507/18989507), done.
    Computing commit graph generation numbers: 100% (7250302/7250302), done.
    Writing out commit graph in 4 passes: 100% (29001208/29001208), done.

Whereas on a medium-sized repository such as linux.git these new
progress bars won't have time to kick in and as before and we'll still
emit output like:

    $ ~/g/git/git --exec-path=$HOME/g/git commit-graph write
    Finding commits for commit graph among packed objects: 100% (6529159/6529159), done.
    Expanding reachable commits in commit graph: 815990, done.
    Computing commit graph generation numbers: 100% (815983/815983), done.
    Writing out commit graph in 4 passes: 100% (3263932/3263932), done.

The "Counting distinct commits in commit graph" phase will spend most
of its time paused at "0/*" as we QSORT(...) the list. That's not
optimal, but at least we don't seem to be stalling anymore most of the
time.

Signed-off-by: Ævar Arnfjörð Bjarmason <avarab@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2019-01-23 13:14:08 -08:00
Ævar Arnfjörð Bjarmason e59c615e3c commit-graph write: remove empty line for readability
Remove the empty line between a QSORT(...) and the subsequent oideq()
for-loop. This makes it clearer that the QSORT(...) is being done so
that we can run the oideq() loop on adjacent OIDs. Amends code added
in 08fd81c9b6 ("commit-graph: implement write_commit_graph()",
2018-04-02).

Signed-off-by: Ævar Arnfjörð Bjarmason <avarab@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2019-01-23 13:14:08 -08:00
Ævar Arnfjörð Bjarmason 7c7b8a7fc7 commit-graph write: add more descriptive progress output
Make the progress output shown when we're searching for commits to
include in the graph more descriptive. This amends code I added in
7b0f229222 ("commit-graph write: add progress output", 2018-09-17).

Now, on linux.git, we'll emit this sort of output in the various modes
we support:

    $ git commit-graph write
    Finding commits for commit graph among packed objects: 100% (6529159/6529159), done.
    [...]

    # Actually we don't emit this since this takes almost no time at
    # all. But if we did (s/_delayed//) we'd show:
    $ git for-each-ref --format='%(objectname)' | git commit-graph write --stdin-commits
    Finding commits for commit graph from 630 refs: 100% (630/630), done.
    [...]

    $ (cd .git/objects/pack/ && ls *idx) | git commit-graph write --stdin-pack
    Finding commits for commit graph in 3 packs: 6529159, done.
    [...]

The middle on of those is going to be the output users might see in
practice, since it'll be emitted when they get the commit graph via
gc.writeCommitGraph=true. But as noted above you need a really large
number of refs for this message to show. It'll show up on a test
repository I have with ~165k refs:

    Finding commits for commit graph from 165203 refs: 100% (165203/165203), done.

Signed-off-by: Ævar Arnfjörð Bjarmason <avarab@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2019-01-23 13:14:08 -08:00
Ævar Arnfjörð Bjarmason d9b1b309cf commit-graph write: show progress for object search
Show the percentage progress for the "Finding commits for commit
graph" phase for the common case where we're operating on all packs in
the repository, as "commit-graph write" or "gc" will do.

Before we'd emit on e.g. linux.git with "commit-graph write":

    Finding commits for commit graph: 6529159, done.
    [...]

And now:

    Finding commits for commit graph: 100% (6529159/6529159), done.
    [...]

Since the commit graph only includes those commits that are packed
(via for_each_packed_object(...)) the approximate_object_count()
returns the actual number of objects we're going to process.

Still, it is possible due to a race with "gc" or another process
maintaining packs that the number of objects we're going to process is
lower than what approximate_object_count() reported. In that case we
don't want to stop the progress bar short of 100%. So let's make sure
it snaps to 100% at the end.

The inverse case is also possible and more likely. I.e. that a new
pack has been added between approximate_object_count() and
for_each_packed_object(). In that case the percentage will go beyond
100%, and we'll do nothing to snap it back to 100% at the end.

Signed-off-by: Ævar Arnfjörð Bjarmason <avarab@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2019-01-23 13:14:08 -08:00
Ævar Arnfjörð Bjarmason 289447397c commit-graph write: more descriptive "writing out" output
Make the "Writing out" part of the progress output more
descriptive. Depending on the shape of the graph we either make 3 or 4
passes over it.

Let's present this information to the user in case they're wondering
what this number, which is much larger than their number of commits,
has to do with writing out the commit graph. Now e.g. on linux.git we
emit:

    $ ~/g/git/git --exec-path=$HOME/g/git -C ~/g/linux commit-graph write
    Finding commits for commit graph: 6529159, done.
    Expanding reachable commits in commit graph: 815990, done.
    Computing commit graph generation numbers: 100% (815983/815983), done.
    Writing out commit graph in 4 passes: 100% (3263932/3263932), done.

A note on i18n: Why are we using the Q_() function and passing a
number & English text for a singular which'll never be used? Because
the plural rules of translated languages may not match those of
English, and to use the plural function we need to use this format.

Signed-off-by: Ævar Arnfjörð Bjarmason <avarab@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2019-01-23 13:14:08 -08:00
Ævar Arnfjörð Bjarmason 53035c4f0b commit-graph write: add "Writing out" progress output
Add progress output to be shown when we're writing out the
commit-graph, this adds to the output already added in 7b0f229222
("commit-graph write: add progress output", 2018-09-17).

As noted in that commit most of the progress output isn't displayed on
small repositories, but before this change we'd noticeably hang for
2-3 seconds at the end on medium sized repositories such as linux.git.

Now we'll instead show output like this, and reduce the
human-observable times at which we're not producing progress output:

    $ ~/g/git/git --exec-path=$HOME/g/git -C ~/g/2015-04-03-1M-git commit-graph write
    Finding commits for commit graph: 13064614, done.
    Expanding reachable commits in commit graph: 1000447, done.
    Computing commit graph generation numbers: 100% (1000447/1000447), done.
    Writing out commit graph: 100% (3001341/3001341), done.

This "Writing out" number is 3x or 4x the number of commits, depending
on the graph we're processing. A later change will make this explicit
to the user.

Signed-off-by: Ævar Arnfjörð Bjarmason <avarab@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2019-01-23 13:14:08 -08:00
SZEDER Gábor 857ba928a4 commit-graph: don't call write_graph_chunk_extra_edges() unnecessarily
The optional 'Extra Edge List' chunk of the commit graph file stores
parent information for commits with more than two parents.  Since the
chunk is optional, write_commit_graph() looks through all commits to
find those with more than two parents, and then writes the commit
graph file header accordingly, i.e. if there are no such commits, then
there won't be a 'Extra Edge List' chunk written, only the three
mandatory chunks.

However, when it later comes to writing actual chunk data,
write_commit_graph() unconditionally invokes
write_graph_chunk_extra_edges(), even when it was decided earlier that
that chunk won't be written.  Strictly speaking there is no bug here,
because write_graph_chunk_extra_edges() won't write anything if it
doesn't find any commits with more than two parents, but then it
unnecessarily and in vain looks through all commits once again in
search for such commits.

Don't call write_graph_chunk_extra_edges() when that chunk won't be
written to spare an unnecessary iteration over all commits.

Signed-off-by: SZEDER Gábor <szeder.dev@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2019-01-23 13:12:56 -08:00
SZEDER Gábor 5af7417bd8 commit-graph: rename "large edges" to "extra edges"
The optional 'Large Edge List' chunk of the commit graph file stores
parent information for commits with more than two parents, and the
names of most of the macros, variables, struct fields, and functions
related to this chunk contain the term "large edges", e.g.
write_graph_chunk_large_edges().  However, it's not a really great
term, as the edges to the second and subsequent parents stored in this
chunk are not any larger than the edges to the first and second
parents stored in the "main" 'Commit Data' chunk.  It's the number of
edges, IOW number of parents, that is larger compared to non-merge and
"regular" two-parent merge commits.  And indeed, two functions in
'commit-graph.c' have a local variable called 'num_extra_edges' that
refer to the same thing, and this "extra edges" term is much better at
describing these edges.

So let's rename all these references to "large edges" in macro,
variable, function, etc. names to "extra edges".  There is a
GRAPH_OCTOPUS_EDGES_NEEDED macro as well; for the sake of consistency
rename it to GRAPH_EXTRA_EDGES_NEEDED.

We can do so safely without causing any incompatibility issues,
because the term "large edges" doesn't come up in the file format
itself in any form (the chunk's magic is {'E', 'D', 'G', 'E'}, there
is no 'L' in there), but only in the specification text.  The string
"large edges", however, does come up in the output of 'git
commit-graph read' and in tests looking at its input, but that command
is explicitly documented as debugging aid, so we can change its output
and the affected tests safely.

Signed-off-by: SZEDER Gábor <szeder.dev@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2019-01-22 11:33:46 -08:00
Ævar Arnfjörð Bjarmason d7574c95bb commit-graph write: use pack order when finding commits
Slightly optimize the "commit-graph write" step by using
FOR_EACH_OBJECT_PACK_ORDER with for_each_object_in_pack(). See commit
[1] and [2] for the facility and a similar optimization for "cat-file".

On Linux it is around 5% slower to run:

    echo 1 >/proc/sys/vm/drop_caches &&
    cat .git/objects/pack/* >/dev/null &&
    git cat-file --batch-all-objects --batch-check --unordered

Than the same thing with the "cat" omitted. This is as expected, since
we're iterating in pack order and the "cat" is extra work.

Before this change the opposite was true of "commit-graph write". We
were 6% faster if we first ran "cat" to efficiently populate the FS
cache for our sole big pack on linux.git, than if we had populated it
via for_each_object_in_pack(). Now we're 3% faster without the "cat"
instead.

My tests were done on an unloaded Linux 3.10 system with 10 runs for
each. Derrick Stolee did his own tests on Windows[3] showing a 2%
improvement with a high degree of accuracy.

1. 736eb88fdc ("for_each_packed_object: support iterating in
   pack-order", 2018-08-10)

2. 0750bb5b51 ("cat-file: support "unordered" output for
   --batch-all-objects", 2018-08-10)

3. https://public-inbox.org/git/f71fa868-25e8-a9c9-46a6-611b987f1a8f@gmail.com/

Signed-off-by: Ævar Arnfjörð Bjarmason <avarab@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2019-01-22 11:32:56 -08:00
Junio C Hamano d01a3faa50 Merge branch 'ds/commit-graph-assert-missing-parents'
Tightening error checking in commit-graph writer.

* ds/commit-graph-assert-missing-parents:
  commit-graph: writing missing parents is a BUG
2019-01-18 13:49:53 -08:00
Josh Steadmon d2b86fbaa1 commit-graph: fix buffer read-overflow
fuzz-commit-graph identified a case where Git will read past the end of
a buffer containing a commit graph if the graph's header has an
incorrect chunk count. A simple bounds check in parse_commit_graph()
prevents this.

Signed-off-by: Josh Steadmon <steadmon@google.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2019-01-15 20:32:00 -08:00
Josh Steadmon aa658574bf commit-graph, fuzz: add fuzzer for commit-graph
Break load_commit_graph_one() into a new function, parse_commit_graph().
The latter function operates on arbitrary buffers, which makes it
suitable as a fuzzing target. Since parse_commit_graph() is only called
by load_commit_graph_one() (and the fuzzer described below), we omit
error messages that would be duplicated by the caller.

Adds fuzz-commit-graph.c, which provides a fuzzing entry point
compatible with libFuzzer (and possibly other fuzzing engines).

Signed-off-by: Josh Steadmon <steadmon@google.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2019-01-15 20:31:49 -08:00
Junio C Hamano d4c9027021 Merge branch 'ab/commit-graph-progress-fix'
* ab/commit-graph-progress-fix:
  commit-graph: split up close_reachable() progress output
2019-01-14 15:29:28 -08:00
Derrick Stolee cce99cd8c6 commit-graph: writing missing parents is a BUG
When writing a commit-graph, we write GRAPH_MISSING_PARENT if the
parent's object id does not appear in the list of commits to be
written into the commit-graph. This was done as the initial design
allowed commits to have missing parents, but the final version
requires the commit-graph to be closed under reachability. Thus,
this GRAPH_MISSING_PARENT value should never be written.

However, there are reasons why it could be written! These range
from a bug in the reachable-closure code to a memory error causing
the binary search into the list of object ids to fail. In either
case, we should fail fast and avoid writing the commit-graph file
with bad data.

Remove the GRAPH_MISSING_PARENT constant in favor of the constant
GRAPH_EDGE_LAST_MASK, which has the same value.

Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2019-01-02 15:00:26 -08:00
Stefan Beller 4f542b7a7f commit-graph: convert remaining functions to handle any repo
Convert all functions to handle arbitrary repositories in commit-graph.c
that are used by functions taking a repository argument already.

Notable exclusion is write_commit_graph and its local functions as that
only works on the_repository.

Signed-off-by: Stefan Beller <sbeller@google.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-12-28 10:06:33 -08:00
Ævar Arnfjörð Bjarmason 01ca387774 commit-graph: split up close_reachable() progress output
Amend the progress output added in 7b0f229222 ("commit-graph write:
add progress output", 2018-09-17) so that the total numbers it reports
aren't higher than the total number of commits anymore. See [1] for a
bug report pointing that out.

When I added this I wasn't intending to provide an accurate count, but
just have some progress output to show the user the command wasn't
hanging[2]. But since we are showing numbers, let's make them
accurate. The progress descriptions were suggested by Derrick Stolee
in [3].

As noted in [2] we are unlikely to show anything except the "Expanding
reachable..." message even on fairly large repositories such as
linux.git. On a test repository I have with north of 7 million commits
all of these are displayed. Two of them don't show up for long, but as
noted in [5] future-proofing this for if the loops become more
expensive in the future makes sense.

1. https://public-inbox.org/git/20181010203738.GE23446@szeder.dev/
2. https://public-inbox.org/git/87pnwhea8y.fsf@evledraar.gmail.com/
3. https://public-inbox.org/git/f7a0cbee-863c-61d3-4959-5cec8b43c705@gmail.com/
4. https://public-inbox.org/git/20181015160545.GG19800@szeder.dev/
5. https://public-inbox.org/git/87murle8da.fsf@evledraar.gmail.com/

Reported-by: SZEDER Gábor <szeder.dev@gmail.com>
Helped-by: Derrick Stolee <stolee@gmail.com>
Signed-off-by: Ævar Arnfjörð Bjarmason <avarab@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-11-20 12:25:34 +09:00
brian m. carlson c166599862 commit-graph: convert to using the_hash_algo
Instead of using hard-coded constants for object sizes, use
the_hash_algo to look them up.  In addition, use a function call to look
up the object ID version and produce the correct value.  For now, we use
version 1, which means to use the default algorithm used in the rest of
the repository.

Signed-off-by: brian m. carlson <sandals@crustytoothpaste.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-11-14 16:54:53 +09:00
Jeff King f0eaf63819 sha1-file: use an object_directory for the main object dir
Our handling of alternate object directories is needlessly different
from the main object directory. As a result, many places in the code
basically look like this:

  do_something(r->objects->objdir);

  for (odb = r->objects->alt_odb_list; odb; odb = odb->next)
        do_something(odb->path);

That gets annoying when do_something() is non-trivial, and we've
resorted to gross hacks like creating fake alternates (see
find_short_object_filename()).

Instead, let's give each raw_object_store a unified list of
object_directory structs. The first will be the main store, and
everything after is an alternate. Very few callers even care about the
distinction, and can just loop over the whole list (and those who care
can just treat the first element differently).

A few observations:

  - we don't need r->objects->objectdir anymore, and can just
    mechanically convert that to r->objects->odb->path

  - object_directory's path field needs to become a real pointer rather
    than a FLEX_ARRAY, in order to fill it with expand_base_dir()

  - we'll call prepare_alt_odb() earlier in many functions (i.e.,
    outside of the loop). This may result in us calling it even when our
    function would be satisfied looking only at the main odb.

    But this doesn't matter in practice. It's not a very expensive
    operation in the first place, and in the majority of cases it will
    be a noop. We call it already (and cache its results) in
    prepare_packed_git(), and we'll generally check packs before loose
    objects. So essentially every program is going to call it
    immediately once per program.

    Arguably we should just prepare_alt_odb() immediately upon setting
    up the repository's object directory, which would save us sprinkling
    calls throughout the code base (and forgetting to do so has been a
    source of subtle bugs in the past). But I've stopped short of that
    here, since there are already a lot of other moving parts in this
    patch.

  - Most call sites just get shorter. The check_and_freshen() functions
    are an exception, because they have entry points to handle local and
    nonlocal directories separately.

Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-11-13 14:22:03 +09:00
Jeff King 263db403fa rename "alternate_object_database" to "object_directory"
In preparation for unifying the handling of alt odb's and the normal
repo object directory, let's use a more neutral name. This patch is
purely mechanical, swapping the type name, and converting any variables
named "alt" to "odb". There should be no functional change, but it will
reduce the noise in subsequent diffs.

Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-11-13 14:22:02 +09:00
Junio C Hamano d4cd2dd214 Merge branch 'ds/commit-graph-leakfix'
Code clean-up.

* ds/commit-graph-leakfix:
  commit-graph: reduce initial oid allocation
  builtin/commit-graph.c: UNLEAK variables
  commit-graph: clean up leaked memory during write
2018-10-19 13:34:07 +09:00
Junio C Hamano 6d8f8ebb74 Merge branch 'ds/commit-graph-with-grafts'
The recently introduced commit-graph auxiliary data is incompatible
with mechanisms such as replace & grafts that "breaks" immutable
nature of the object reference relationship.  Disable optimizations
based on its use (and updating existing commit-graph) when these
incompatible features are in use in the repository.

* ds/commit-graph-with-grafts:
  commit-graph: close_commit_graph before shallow walk
  commit-graph: not compatible with uninitialized repo
  commit-graph: not compatible with grafts
  commit-graph: not compatible with replace objects
  test-repository: properly init repo
  commit-graph: update design document
  refs.c: upgrade for_each_replace_ref to be a each_repo_ref_fn callback
  refs.c: migrate internal ref iteration to pass thru repository argument
2018-10-16 16:15:59 +09:00
Junio C Hamano 36d767d02e Merge branch 'ab/commit-graph-progress'
Generation of (experimental) commit-graph files have so far been
fairly silent, even though it takes noticeable amount of time in a
meaningfully large repository.  The users will now see progress
output.

* ab/commit-graph-progress:
  gc: fix regression in 7b0f229222 impacting --quiet
  commit-graph verify: add progress output
  commit-graph write: add progress output
2018-10-16 16:15:58 +09:00
Derrick Stolee 53c36670e7 commit-graph: reduce initial oid allocation
While writing a commit-graph file, we store the full list of
commits in a flat list. We use this list for sorting and ensuring
we are closed under reachability.

The initial allocation assumed that (at most) one in four objects
is a commit. This is a dramatic over-count for many repos,
especially large ones. Since we grow the repo dynamically, reduce
this count by a factor of eight. We still set it to a minimum of
1024 before allocating.

Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-10-07 08:25:05 +09:00
Derrick Stolee f4dbdfc4d5 commit-graph: clean up leaked memory during write
The write_commit_graph() method in commit-graph.c leaks some lits
and strings during execution. In addition, a list of strings is
leaked in write_commit_graph_reachable(). Clean these up so our
memory checking is cleaner.

Further, if we use a list of pack-files to find the commits, we
can leak the packed_git structs after scanning them for commits.

Running the following commands demonstrates the leak before and
the fix after:

* valgrind --leak-check=full ./git commit-graph write --reachable
* valgrind --leak-check=full ./git commit-graph write --stdin-packs

Signed-off-by: Martin Ågren <martin.agren@gmail.com>
Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-10-07 08:25:05 +09:00
Junio C Hamano 06880cff38 Merge branch 'ds/commit-graph-tests'
We can now optionally run tests with commit-graph enabled.

* ds/commit-graph-tests:
  commit-graph: define GIT_TEST_COMMIT_GRAPH
2018-09-17 13:53:58 -07:00
Junio C Hamano 769af0fd9e Merge branch 'jk/cocci'
spatch transformation to replace boolean uses of !hashcmp() to
newly introduced oideq() is added, and applied, to regain
performance lost due to support of multiple hash algorithms.

* jk/cocci:
  show_dirstat: simplify same-content check
  read-cache: use oideq() in ce_compare functions
  convert hashmap comparison functions to oideq()
  convert "hashcmp() != 0" to "!hasheq()"
  convert "oidcmp() != 0" to "!oideq()"
  convert "hashcmp() == 0" to hasheq()
  convert "oidcmp() == 0" to oideq()
  introduce hasheq() and oideq()
  coccinelle: use <...> for function exclusion
2018-09-17 13:53:57 -07:00
Junio C Hamano 1b7a91da71 Merge branch 'ds/reachable'
The code for computing history reachability has been shuffled,
obtained a bunch of new tests to cover them, and then being
improved.

* ds/reachable:
  commit-reach: correct accidental #include of C file
  commit-reach: use can_all_from_reach
  commit-reach: make can_all_from_reach... linear
  commit-reach: replace ref_newer logic
  test-reach: test commit_contains
  test-reach: test can_all_from_reach_with_flags
  test-reach: test reduce_heads
  test-reach: test get_merge_bases_many
  test-reach: test is_descendant_of
  test-reach: test in_merge_bases
  test-reach: create new test tool for ref_newer
  commit-reach: move can_all_from_reach_with_flags
  upload-pack: generalize commit date cutoff
  upload-pack: refactor ok_to_give_up()
  upload-pack: make reachable() more generic
  commit-reach: move commit_contains from ref-filter
  commit-reach: move ref_newer from remote.c
  commit.h: remove method declarations
  commit-reach: move walk methods from commit.c
2018-09-17 13:53:52 -07:00
Ævar Arnfjörð Bjarmason 1f7f557fd3 commit-graph verify: add progress output
For the reasons explained in the "commit-graph write: add progress
output" commit leading up to this one, emit progress on "commit-graph
verify". Since e0fd51e1d7 ("fsck: verify commit-graph", 2018-06-27)
"git fsck" has called this command if core.commitGraph=true, but
there's been no progress output to indicate that anything was
different. Now there is (on my tiny dotfiles.git repository):

    $ git -c core.commitGraph=true -C ~/ fsck
    Checking object directories: 100% (256/256), done.
    Checking objects: 100% (2821/2821), done.
    dangling blob 5b8bbdb9b788ed90459f505b0934619c17cc605b
    Verifying commits in commit graph: 100% (867/867), done.

And on a larger repository, such as the 2015-04-03-1M-git.git test
repository:

    $ time git -c core.commitGraph=true -C ~/g/2015-04-03-1M-git/ commit-graph verify
    Verifying commits in commit graph: 100% (1000447/1000447), done.
    real    0m7.813s
    [...]

Since the "commit-graph verify" subcommand is never called from "git
gc", we don't have to worry about passing some some "report_progress"
progress variable around for this codepath.

Signed-off-by: Ævar Arnfjörð Bjarmason <avarab@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-09-17 10:12:30 -07:00
Ævar Arnfjörð Bjarmason 7b0f229222 commit-graph write: add progress output
Before this change the "commit-graph write" command didn't report any
progress. On my machine this command takes more than 10 seconds to
write the graph for linux.git, and around 1m30s on the
2015-04-03-1M-git.git[1] test repository (a test case for a large
monorepository).

Furthermore, since the gc.writeCommitGraph setting was added in
d5d5d7b641 ("gc: automatically write commit-graph files", 2018-06-27),
there was no indication at all from a "git gc" run that anything was
different. This why one of the progress bars being added here uses
start_progress() instead of start_delayed_progress(), so that it's
guaranteed to be seen. E.g. on my tiny 867 commit dotfiles.git
repository:

    $ git -c gc.writeCommitGraph=true gc
    Enumerating objects: 2821, done.
    [...]
    Computing commit graph generation numbers: 100% (867/867), done.

On larger repositories, such as linux.git the delayed progress bar(s)
will kick in, and we'll show what's going on instead of, as was
previously happening, printing nothing while we write the graph:

    $ git -c gc.writeCommitGraph=true gc
    [...]
    Annotating commits in commit graph: 1565573, done.
    Computing commit graph generation numbers: 100% (782484/782484), done.

Note that here we don't show "Finding commits for commit graph", this
is because under "git gc" we seed the search with the commit
references in the repository, and that set is too small to show any
progress, but would e.g. on a smaller repo such as git.git with
--stdin-commits:

    $ git rev-list --all | git -c gc.writeCommitGraph=true write --stdin-commits
    Finding commits for commit graph: 100% (162576/162576), done.
    Computing commit graph generation numbers: 100% (162576/162576), done.

With --stdin-packs we don't show any estimation of how much is left to
do. This is because we might be processing more than one pack. We
could be less lazy here and show progress, either by detecting that
we're only processing one pack, or by first looping over the packs to
discover how many commits they have. I don't see the point in doing
that work. So instead we get (on 2015-04-03-1M-git.git):

    $ echo pack-<HASH>.idx | git -c gc.writeCommitGraph=true --exec-path=$PWD commit-graph write --stdin-packs
    Finding commits for commit graph: 13064614, done.
    Annotating commits in commit graph: 3001341, done.
    Computing commit graph generation numbers: 100% (1000447/1000447), done.

No GC mode uses --stdin-packs. It's what they use at Microsoft to
manually compute the generation numbers for their collection of large
packs which are never coalesced.

The reason we need a "report_progress" variable passed down from "git
gc" is so that we don't report this output when we're running in the
process "git gc --auto" detaches from the terminal.

Since we write the commit graph from the "git gc" process itself (as
opposed to what we do with say the "git repack" phase), we'd end up
writing the output to .git/gc.log and reporting it to the user next
time as part of the "The last gc run reported the following[...]"
error, see 329e6e8794 ("gc: save log from daemonized gc --auto and
print it next time", 2015-09-19).

So we must keep track of whether or not we're running in that
demonized mode, and if so print no progress.

See [2] and subsequent replies for a discussion of an approach not
taken in compute_generation_numbers(). I.e. we're saying "Computing
commit graph generation numbers", even though on an established
history we're mostly skipping over all the work we did in the
past. This is similar to the white lie we tell in the "Writing
objects" phase (not all are objects being written).

Always showing progress is considered more important than
accuracy. I.e. on a repository like 2015-04-03-1M-git.git we'd hang
for 6 seconds with no output on the second "git gc" if no changes were
made to any objects in the interim if we'd take the approach in [2].

1. https://github.com/avar/2015-04-03-1M-git

2. <c6960252-c095-fb2b-e0bc-b1e6bb261614@gmail.com>
   (https://public-inbox.org/git/c6960252-c095-fb2b-e0bc-b1e6bb261614@gmail.com/)

Signed-off-by: Ævar Arnfjörð Bjarmason <avarab@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-09-17 10:12:30 -07:00
Jeff King 67947c34ae convert "hashcmp() != 0" to "!hasheq()"
This rounds out the previous three patches, covering the
inequality logic for the "hash" variant of the functions.

As with the previous three, the accompanying code changes
are the mechanical result of applying the coccinelle patch;
see those patches for more discussion.

Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-08-29 11:32:49 -07:00
Jeff King 9001dc2a74 convert "oidcmp() != 0" to "!oideq()"
This is the flip side of the previous two patches: checking
for a non-zero oidcmp() can be more strictly expressed as
inequality. Like those patches, we write "!= 0" in the
coccinelle transformation, which covers by isomorphism the
more common:

  if (oidcmp(E1, E2))

As with the previous two patches, this patch can be achieved
almost entirely by running "make coccicheck"; the only
differences are manual line-wrap fixes to match the original
code.

There is one thing to note for anybody replicating this,
though: coccinelle 1.0.4 seems to miss the case in
builtin/tag.c, even though it's basically the same as all
the others. Running with 1.0.7 does catch this, so
presumably it's just a coccinelle bug that was fixed in the
interim.

Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-08-29 11:32:49 -07:00
Jeff King 4a7e27e957 convert "oidcmp() == 0" to oideq()
Using the more restrictive oideq() should, in the long run,
give the compiler more opportunities to optimize these
callsites. For now, this conversion should be a complete
noop with respect to the generated code.

The result is also perhaps a little more readable, as it
avoids the "zero is equal" idiom. Since it's so prevalent in
C, I think seasoned programmers tend not to even notice it
anymore, but it can sometimes make for awkward double
negations (e.g., we can drop a few !!oidcmp() instances
here).

This patch was generated almost entirely by the included
coccinelle patch. This mechanical conversion should be
completely safe, because we check explicitly for cases where
oidcmp() is compared to 0, which is what oideq() is doing
under the hood. Note that we don't have to catch "!oidcmp()"
separately; coccinelle's standard isomorphisms make sure the
two are treated equivalently.

I say "almost" because I did hand-edit the coccinelle output
to fix up a few style violations (it mostly keeps the
original formatting, but sometimes unwraps long lines).

Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-08-29 11:32:49 -07:00
Derrick Stolee 859fdc0c3c commit-graph: define GIT_TEST_COMMIT_GRAPH
The commit-graph feature is tested in isolation by
t5318-commit-graph.sh and t6600-test-reach.sh, but there are many
more interesting scenarios involving commit walks. Many of these
scenarios are covered by the existing test suite, but we need to
maintain coverage when the optional commit-graph structure is not
present.

To allow running the full test suite with the commit-graph present,
add a new test environment variable, GIT_TEST_COMMIT_GRAPH. Similar
to GIT_TEST_SPLIT_INDEX, this variable makes every Git command try
to load the commit-graph when parsing commits, and writes the
commit-graph file after every 'git commit' command.

There are a few tests that rely on commits not existing in
pack-files to trigger important events, so manually set
GIT_TEST_COMMIT_GRAPH to false for the necessary commands.

There is one test in t6024-recursive-merge.sh that relies on the
merge-base algorithm picking one of two ambiguous merge-bases, and
the commit-graph feature changes which merge-base is picked.

Helped-by: Eric Sunshine <sunshine@sunshineco.com>
Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-08-29 10:44:31 -07:00
Derrick Stolee 829a321569 commit-graph: close_commit_graph before shallow walk
Call close_commit_graph() when about to start a rev-list walk that
includes shallow commits. This is necessary in code paths that "fake"
shallow commits for the sake of fetch. Specifically, test 351 in
t5500-fetch-pack.sh runs

	git fetch --shallow-exclude one origin

with a file-based transfer. When the "remote" has a commit-graph, we do
not prevent the commit-graph from being loaded, but then the commits are
intended to be dynamically transferred into shallow commits during
get_shallow_commits_by_rev_list(). By closing the commit-graph before
this call, we prevent this interaction.

Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-08-21 10:22:51 -07:00
Derrick Stolee 5cef295f28 commit-graph: not compatible with uninitialized repo
Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-08-21 10:22:51 -07:00
Derrick Stolee 20fd6d5799 commit-graph: not compatible with grafts
Augment commit_graph_compatible(r) to return false when the given
repository r has commit grafts or is a shallow clone. Test that in these
situations we ignore existing commit-graph files and we do not write new
commit-graph files.

Helped-by: Jakub Narebski <jnareb@gmail.com>
Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-08-21 10:22:51 -07:00
Derrick Stolee d6538246d3 commit-graph: not compatible with replace objects
Create new method commit_graph_compatible(r) to check if a given
repository r is compatible with the commit-graph feature. Fill the
method with a check to see if replace-objects exist. Test this
interaction succeeds, including ignoring an existing commit-graph and
failing to write a new commit-graph. However, we do ensure that
we write a new commit-graph by setting read_replace_refs to 0, thereby
ignoring the replace refs.

Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-08-21 10:22:51 -07:00
Junio C Hamano 0c54cdaf65 Merge branch 'jk/for-each-object-iteration'
The API to iterate over all objects learned to optionally list
objects in the order they appear in packfiles, which helps locality
of access if the caller accesses these objects while as objects are
enumerated.

* jk/for-each-object-iteration:
  for_each_*_object: move declarations to object-store.h
  cat-file: use a single strbuf for all output
  cat-file: split batch "buf" into two variables
  cat-file: use oidset check-and-insert
  cat-file: support "unordered" output for --batch-all-objects
  cat-file: rename batch_{loose,packed}_object callbacks
  t1006: test cat-file --batch-all-objects with duplicates
  for_each_packed_object: support iterating in pack-order
  for_each_*_object: give more comprehensive docstrings
  for_each_*_object: take flag arguments as enum
  for_each_*_object: store flag definitions in a single location
2018-08-20 11:33:52 -07:00
Junio C Hamano 4bea8485e3 Merge branch 'nd/i18n'
Many more strings are prepared for l10n.

* nd/i18n: (23 commits)
  transport-helper.c: mark more strings for translation
  transport.c: mark more strings for translation
  sha1-file.c: mark more strings for translation
  sequencer.c: mark more strings for translation
  replace-object.c: mark more strings for translation
  refspec.c: mark more strings for translation
  refs.c: mark more strings for translation
  pkt-line.c: mark more strings for translation
  object.c: mark more strings for translation
  exec-cmd.c: mark more strings for translation
  environment.c: mark more strings for translation
  dir.c: mark more strings for translation
  convert.c: mark more strings for translation
  connect.c: mark more strings for translation
  config.c: mark more strings for translation
  commit-graph.c: mark more strings for translation
  builtin/replace.c: mark more strings for translation
  builtin/pack-objects.c: mark more strings for translation
  builtin/grep.c: mark strings for translation
  builtin/config.c: mark more strings for translation
  ...
2018-08-15 15:08:23 -07:00
Jeff King 736eb88fdc for_each_packed_object: support iterating in pack-order
We currently iterate over objects within a pack in .idx
order, which uses the object hashes. That means that it
is effectively random with respect to the location of the
object within the pack. If you're going to access the actual
object data, there are two reasons to move linearly through
the pack itself:

  1. It improves the locality of access in the packfile. In
     the cold-cache case, this may mean fewer disk seeks, or
     better usage of disk cache.

  2. We store related deltas together in the packfile. Which
     means that the delta base cache can operate much more
     efficiently if we visit all of those related deltas in
     sequence, as the earlier items are likely to still be
     in the cache.  Whereas if we visit the objects in
     random order, our cache entries are much more likely to
     have been evicted by unrelated deltas in the meantime.

So in general, if you're going to access the object contents
pack order is generally going to end up more efficient.

But if you're simply generating a list of object names, or
if you're going to end up sorting the result anyway, you're
better off just using the .idx order, as finding the pack
order means generating the in-memory pack-revindex.
According to the numbers in 8b8dfd5132 (pack-revindex:
radix-sort the revindex, 2013-07-11), that takes about 200ms
for linux.git, and 20ms for git.git (those numbers are a few
years old but are still a good ballpark).

That makes it a good optimization for some cases (we can
save tens of seconds in git.git by having good locality of
delta access, for a 20ms cost), but a bad one for others
(e.g., right now "cat-file --batch-all-objects
--batch-check="%(objectname)" is 170ms in git.git, so adding
20ms to that is noticeable).

Hence this patch makes it an optional flag. You can't
actually do any interesting timings yet, as it's not plumbed
through to any user-facing tools like cat-file. That will
come in a later patch.

Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-08-13 13:48:28 -07:00
Nguyễn Thái Ngọc Duy 4f5b532d18 commit-graph.c: mark more strings for translation
Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-07-23 11:19:09 -07:00
Derrick Stolee 6cc017431c commit-reach: use can_all_from_reach
The is_descendant_of method previously used in_merge_bases() to check if
the commit can reach any of the commits in the provided list. This had
two performance problems:

1. The performance is quadratic in worst-case.

2. A single in_merge_bases() call requires walking beyond the target
   commit in order to find the full set of boundary commits that may be
   merge-bases.

The can_all_from_reach method avoids this quadratic behavior and can
limit the search beyond the target commits using generation numbers. It
requires a small prototype adjustment to stop using commit-date as a
cutoff, as that optimization is no longer appropriate here.

Since in_merge_bases() uses paint_down_to_common(), is_descendant_of()
naturally found cutoffs to avoid walking the entire commit graph. Since
we want to always return the correct result, we cannot use the
min_commit_date cutoff in can_all_from_reach. We then rely on generation
numbers to provide the cutoff.

Since not all repos will have a commit-graph file, nor will we always
have generation numbers computed for a commit-graph file, create a new
method, generation_numbers_enabled(), that checks for a commit-graph
file and sees if the first commit in the file has a non-zero generation
number. In the case that we do not have generation numbers, use the old
logic for is_descendant_of().

Performance was meausured on a copy of the Linux repository using the
'test-tool reach is_descendant_of' command using this input:

A:v4.9
X:v4.10
X:v4.11
X:v4.12
X:v4.13
X:v4.14
X:v4.15
X:v4.16
X:v4.17
X.v3.0

Note that this input is tailored to demonstrate the quadratic nature of
the previous method, as it will compute merge-bases for v4.9 versus all
of the later versions before checking against v4.1.

Before: 0.26 s
 After: 0.21 s

Since we previously used the is_descendant_of method in the ref_newer
method, we also measured performance there using
'test-tool reach ref_newer' with this input:

A:v4.9
B:v3.19

Before: 0.10 s
 After: 0.08 s

By adding a new commit with parent v3.19, we test the non-reachable case
of ref_newer:

Before: 0.09 s
 After: 0.08 s

Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-07-20 15:38:56 -07:00
Jonathan Tan dade47c06c commit-graph: add repo arg to graph readers
Add a struct repository argument to the functions in commit-graph.h that
read the commit graph. (This commit does not affect functions that write
commit graphs.)

Because the commit graph functions can now read the commit graph of any
repository, the global variable core_commit_graph has been removed.
Instead, the config option core.commitGraph is now read on the first
time in a repository that a commit is attempted to be parsed using its
commit graph.

This commit includes a test that exercises the functionality on an
arbitrary repository that is not the_repository.

Signed-off-by: Jonathan Tan <jonathantanmy@google.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-07-17 15:47:48 -07:00
Jonathan Tan 8527750626 commit-graph: store graph in struct object_store
Instead of storing commit graphs in static variables, store them in
struct object_store. There are no changes to the signatures of existing
functions - they all still only support the_repository, and support for
other instances of struct repository will be added in a subsequent
commit.

Signed-off-by: Jonathan Tan <jonathantanmy@google.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-07-17 15:47:48 -07:00