More leak fixes.
* ps/leakfixes-part-4: (22 commits)
builtin/diff: free symmetric diff members
diff: free state populated via options
builtin/log: fix leak when showing converted blob contents
userdiff: fix leaking memory for configured diff drivers
builtin/format-patch: fix various trivial memory leaks
diff: fix leak when parsing invalid ignore regex option
unpack-trees: clear index when not propagating it
sequencer: release todo list on error paths
merge-ort: unconditionally release attributes index
builtin/fast-export: plug leaking tag names
builtin/fast-export: fix leaking diff options
builtin/fast-import: plug trivial memory leaks
builtin/notes: fix leaking `struct notes_tree` when merging notes
builtin/rebase: fix leaking `commit.gpgsign` value
config: fix leaking comment character config
submodule-config: fix leaking name entry when traversing submodules
read-cache: fix leaking hashfile when writing index fails
bulk-checkin: fix leaking state TODO
object-name: fix leaking symlink paths in object context
object-file: fix memory leak when reading corrupted headers
...
When flushing a bulk-checking to disk we also reset the `struct
bulk_checkin_packfile` state. But while we free some of its members,
others aren't being free'd, leading to memory leaks:
- The temporary packfile name is not getting freed.
- The `struct hashfile` only gets freed in case we end up calling
`finalize_hashfile()`. There are code paths though where that is not
the case, namely when nothing has been written. For this, we need to
make `free_hashfile()` public.
Fix those leaks.
Signed-off-by: Patrick Steinhardt <ps@pks.im>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
The hashfile API is used to write out a "hashfile", which has a
final checksum (typically SHA-1) at the end. An in-core hashfile
structure has up to two file descriptors and a few buffers that can
only be freed by calling a helper function that is private to the
csum-file implementation.
The usual flow of a user of the API is to first open a file
descriptor for writing, obtain a hashfile associated with that write
file descriptor by calling either hashfd() or hashfd_check(), call
hashwrite() number of times to write data to the file, and then call
finalize_hashfile(), which appends th checksum to the end of the
file, closes file descriptors and releases associated buffers.
But what if a caller finds some error after calling hashfd() to
start the process and/or hashwrite() to send some data to the file,
and wants to abort the operation? The underlying file descriptor is
often managed by the tempfile API, so aborting will clean the file
out of the filesystem, but the resources associated with the in-core
hashfile structure is lost.
Introduce discard_hashfile() API function to allow them to release
the resources held by a hashfile structure the callers want to
dispose of, and use that in read-cache.c:do_write_index(), which is
a central place that writes the index file.
Mark t2107 as leak-free, as this leak in "update-index --cacheinfo"
test that deliberately makes it fail is now plugged.
Signed-off-by: Junio C Hamano <gitster@pobox.com>
The "hash-ll.h" header was introduced via d1cbe1e6d8 (hash-ll.h: split
out of hash.h to remove dependency on repository.h, 2023-04-22) to make
explicit the split between hash-related functions that rely on the
global `the_repository`, and those that don't. This split is no longer
necessary now that we we have removed the reliance on `the_repository`.
Merge "hash-ll.h" back into "hash.h". This causes some code units to not
include "repository.h" anymore, which requires us to add some forward
declarations.
Signed-off-by: Patrick Steinhardt <ps@pks.im>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
hash.h depends upon and includes repository.h, due to the definition and
use of the_hash_algo (defined as the_repository->hash_algo). However,
most headers trying to include hash.h are only interested in the layout
of the structs like object_id. Move the parts of hash.h that do not
depend upon repository.h into a new file hash-ll.h (the "low level"
parts of hash.h), and adjust other files to use this new header where
the convenience inline functions aren't needed.
This allows hash.h and object.h to be fairly small, minimal headers. It
also exposes a lot of hidden dependencies on both path.h (which was
brought in by repository.h) and repository.h (which was previously
implicitly brought in by object.h), so also adjust other files to be
more explicit about what they depend upon.
Signed-off-by: Elijah Newren <newren@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
With the change in the last commit to move several functions to
write-or-die.h, csum-file.h no longer needs to include cache.h.
However, removing that include forces several other C files, which
directly or indirectly dependend upon csum-file.h's inclusion of
cache.h, to now be more explicit about their dependencies.
Signed-off-by: Elijah Newren <newren@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
The hashfile API is useful for generating files that include a trailing
hash of the file's contents up to that point. Using such a hash is
helpful for verifying the file for corruption-at-rest, such as a faulty
drive causing flipped bits.
Git's index file includes this trailing hash, so it uses a 'struct
hashfile' to handle the I/O to the file. This was very convenient to
allow using the hashfile methods during these operations.
However, hashing the file contents during write comes at a performance
penalty. It's slower to hash the bytes on their way to the disk than
without that step. This problem is made worse by the replacement of
hardware-accelerated SHA1 computations with the software-based sha1dc
computation.
This write cost is significant, and the checksum capability is likely
not worth that cost for such a short-lived file. The index is rewritten
frequently and the only time the checksum is checked is during 'git
fsck'. Thus, it would be helpful to allow a user to opt-out of the hash
computation.
We first need to allow Git to opt-out of the hash computation in the
hashfile API. The buffered writes of the API are still helpful, so it
makes sense to make the change here.
Introduce a new 'skip_hash' option to 'struct hashfile'. When set, the
update_fn and final_fn members of the_hash_algo are skipped. When
finalizing the hashfile, the trailing hash is replaced with the null
hash.
This use of a trailing null hash would be desireable in either case,
since we do not want to special case a file format to have a different
length depending on whether it was hashed or not. When the final bytes
of a file are all zero, we can infer that it was written without
hashing, and thus that verification is not available as a check for file
consistency. This also means that we could easily toggle hashing for any
file format we desire.
A version of this patch has existed in the microsoft/git fork since
2017 [1] (the linked commit was rebased in 2018, but the original dates
back to January 2017). Here, the change to make the index use this fast
path is delayed until a later change.
[1] 21fed2d914
Co-authored-by: Kevin Willford <kewillf@microsoft.com>
Signed-off-by: Kevin Willford <kewillf@microsoft.com>
Signed-off-by: Derrick Stolee <derrickstolee@github.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
This commit introduces the infrastructure for the core.fsync
configuration knob. The repository components we want to sync
are identified by flags so that we can turn on or off syncing
for specific components.
If core.fsyncObjectFiles is set and the core.fsync configuration
also includes FSYNC_COMPONENT_LOOSE_OBJECT, we will fsync any
loose objects. This picks the strictest data integrity behavior
if core.fsync and core.fsyncObjectFiles are set to conflicting values.
This change introduces the currently unused fsync_component
helper, which will be used by a later patch that adds fsyncing to
the refs backend.
Actual configuration and documentation of the fsync components
list are in other patches in the series to separate review of
the underlying mechanism from the policy of how it's configured.
Helped-by: Patrick Steinhardt <ps@pks.im>
Signed-off-by: Neeraj Singh <neerajsi@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
When rebuilding the multi-pack index file reusing an existing one,
we used to blindly trust the existing file and ended up carrying
corrupted data into the updated file, which has been corrected.
* tb/midx-use-checksum:
midx: report checksum mismatches during 'verify'
midx: don't reuse corrupt MIDXs when writing
commit-graph: rewrite to use checksum_valid()
csum-file: introduce checksum_valid()
Introduce a new function which checks the validity of a file's trailing
checksum. This is similar to hashfd_check(), but different since it is
intended to be used by callers who aren't writing the same data (like
`git index-pack --verify`), but who instead want to validate the
integrity of data that they are reading.
Rewrite the first of two callers which could benefit from this new
function in pack-check.c. Subsequent callers will be added in the
following patches.
Helped-by: Jeff King <peff@peff.net>
Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
The hashfile API uses a hard-coded buffer size of 8KB and has ever since
it was introduced in c38138c (git-pack-objects: write the pack files
with a SHA1 csum, 2005-06-26). It performs a similar function to the
hashing buffers in read-cache.c, but that code was updated from 8KB to
128KB in f279894 (read-cache: make the index write buffer size 128K,
2021-02-18). The justification there was that do_write_index() improves
from 1.02s to 0.72s. Since our end goal is to have the index writing
code use the hashfile API, we need to unify this buffer size to avoid a
performance regression.
There is a buffer, 'check_buffer', that is used to verify the check_fd
file descriptor. When this buffer increases to 128K to fit the data
being flushed, it causes the stack to overflow the limits placed in the
test suite. To avoid issues with stack size, move both 'buffer' and
'check_buffer' to be heap pointers within 'struct hashfile'. The
'check_buffer' member is left as NULL unless check_fd is set in
hashfd_check(). Both buffers are cleared as part of finalize_hashfile()
which also frees the full structure.
Since these buffers are now on the heap, we can adjust their size based
on the needs of the consumer. In particular, callers to
hashfd_throughput() are expecting to report progress indicators as the
buffer flushes. These callers would prefer the smaller 8k buffer to
avoid large delays between updates, especially for users with slower
networks. When the progress indicator is not used, the larger buffer is
preferrable.
By adding a new trace2 region in the chunk-format API, we can see that
the writing portion of 'git multi-pack-index write' lowers from ~1.49s
to ~1.47s on a Linux machine. These effects may be more pronounced or
diminished on other filesystems. The end-to-end timing is too noisy to
have a definitive change either way.
Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
Add a helper function for hashing and writing 64-bit integers in network
byte order. It returns the number of written bytes. This simplifies
callers that keep track of the file offset, even though this number is a
constant.
Suggested-by: Derrick Stolee <dstolee@microsoft.com>
Original-patch-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: René Scharfe <l.s.r@web.de>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
We will need this helper function in a following commit
to give us total number of bytes fed to the hashfile so far.
Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Christian Couder <chriscool@tuxfamily.org>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
There has been a push to remove extern from function declarations.
Remove some instances of "extern" for function declarations which are
caught by Coccinelle. Note that Coccinelle has some difficulty with
processing functions with `__attribute__` or varargs so some `extern`
declarations are left behind to be dealt with in a future patch.
This was the Coccinelle patch used:
@@
type T;
identifier f;
@@
- extern
T f(...);
and it was run with:
$ git ls-files \*.{c,h} |
grep -v ^compat/ |
xargs spatch --sp-file contrib/coccinelle/noextern.cocci --in-place
Files under `compat/` are intentionally excluded as some are directly
copied from external sources and we should avoid churning them as much
as possible.
Signed-off-by: Denton Liu <liu.denton@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
I looped over the toplevel header files, creating a temporary two-line C
program for each consisting of
#include "git-compat-util.h"
#include $HEADER
This patch is the result of manually fixing errors in compiling those
tiny programs.
Signed-off-by: Elijah Newren <newren@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
If we want to use a hashfile on the temporary file for a lockfile, then
we need finalize_hashfile() to fully write the trailing hash but also keep
the file descriptor open.
Do this by adding a new CSUM_HASH_IN_STREAM flag along with a functional
change that checks this flag before writing the checksum to the stream.
This differs from previous behavior since it would be written if either
CSUM_CLOSE or CSUM_FSYNC is provided.
Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
The hashclose() method behaves very differently depending on the flags
parameter. In particular, the file descriptor is not always closed.
Perform a simple rename of "hashclose()" to "finalize_hashfile()" in
preparation for functional changes.
Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
Convert several direct uses of SHA-1 to use the_hash_algo instead.
Convert one use of the constant 20 as well.
Signed-off-by: brian m. carlson <sandals@crustytoothpaste.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
Rename struct sha1file to struct hashfile, along with all of its related
functions.
The transformation in this commit was made by global search-and-replace.
Signed-off-by: Junio C Hamano <gitster@pobox.com>
The "__attribute__" flag may be a noop on some compilers.
That's OK as long as the code is correct without the
attribute, but in this case it is not. We would typically
end up with a struct that is 2 bytes too long due to struct
padding, breaking both reading and writing of bitmaps.
Instead of marshalling the data in a struct, let's just
provide helpers for reading and writing the appropriate
types. Besides being correct on all platforms, the result is
more efficient and simpler to read.
Signed-off-by: Karsten Blees <blees@dcon.de>
Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
The sha1write function returns an int, but it will always be
"0". The failure-prone parts of the function happen in the
"flush" callback, which cannot pass an error back to us. So
we just end up calling die() during the flush.
Let's just drop the return value altogether, as it only
confuses callers into thinking that it might be useful.
Only one call site actually checked the return value. We can
drop that check, since it just led to a die() anyway.
Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
We are passed a "void *" and write it out without ever
touching it; let's indicate that by using "const".
Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
It is useful to be able to rewind a check-summed file to a certain
previous state after writing data into it using sha1write() API. The
fast-import command does this after streaming a blob data to the packfile
being generated and then noticing that the same blob has already been
written, and it does this with a private code truncate_pack() that is
commented as "Yes, this is a layering violation".
Introduce two API functions, sha1file_checkpoint(), that allows the caller
to save a state of a sha1file, and then later revert it to the saved state.
Use it to reimplement truncate_pack().
Signed-off-by: Junio C Hamano <gitster@pobox.com>
Given an existing .pack file and the .idx file that describes it,
this new mode of operation reads and re-index the packfile and makes
sure the existing .idx file matches the result byte-for-byte.
All the objects in the .pack file are validated during this operation as
well. Unlike verify-pack, which visits each object described in the .idx
file in the SHA-1 order, index-pack efficiently exploits the delta-chain
to avoid rebuilding the objects that are used as the base of deltified
objects over and over again while validating the objects, resulting in
much quicker verification of the .pack file and its .idx file.
This version however cannot verify a .pack/.idx pair with a handcrafted v2
index that uses 64-bit offset representation for offsets that would fit
within 31-bit. You can create such an .idx file by giving a custom offset
to --index-version option to the command.
Signed-off-by: Junio C Hamano <gitster@pobox.com>
* maint:
rebase -i: do not fail when there is no commit to cherry-pick
test-lib: fix color reset in say_color()
fix pread()'s short read in index-pack
Conflicts:
csum-file.c
Since v1.6.0.2~13^2~ the completion of a thin pack uses sha1write() for
its ability to compute a SHA1 on the written data. This also provides
data buffering which, along with commit 92392b4a45, will confuse pread()
whenever an appended object is 1) freed due to memory pressure because
of the depth-first delta processing, and 2) needed again because it has
many delta children, and 3) its data is still buffered by sha1write().
Let's fix the issue by simply forcing cached data out when such an
object is written so it can be pread()'d at leisure.
Signed-off-by: Nicolas Pitre <nico@cam.org>
Signed-off-by: Shawn O. Pearce <spearce@spearce.org>
On ARM I have the following compilation errors:
CC fast-import.o
In file included from cache.h:8,
from builtin.h:6,
from fast-import.c:142:
arm/sha1.h:14: error: conflicting types for 'SHA_CTX'
/usr/include/openssl/sha.h:105: error: previous declaration of 'SHA_CTX' was here
arm/sha1.h:16: error: conflicting types for 'SHA1_Init'
/usr/include/openssl/sha.h:115: error: previous declaration of 'SHA1_Init' was here
arm/sha1.h:17: error: conflicting types for 'SHA1_Update'
/usr/include/openssl/sha.h:116: error: previous declaration of 'SHA1_Update' was here
arm/sha1.h:18: error: conflicting types for 'SHA1_Final'
/usr/include/openssl/sha.h:117: error: previous declaration of 'SHA1_Final' was here
make: *** [fast-import.o] Error 1
This is because openssl header files are always included in
git-compat-util.h since commit 684ec6c63c whenever NO_OPENSSL is not
set, which somehow brings in <openssl/sha1.h> clashing with the custom
ARM version. Compilation of git is probably broken on PPC too for the
same reason.
Turns out that the only file requiring openssl/ssl.h and openssl/err.h
is imap-send.c. But only moving those problematic includes there
doesn't solve the issue as it also includes cache.h which brings in the
conflicting local SHA1 header file.
As suggested by Jeff King, the best solution is to rename our references
to SHA1 functions and structure to something git specific, and define those
according to the implementation used.
Signed-off-by: Nicolas Pitre <nico@cam.org>
Signed-off-by: Shawn O. Pearce <spearce@spearce.org>
This means that we can depend on packs always being stable on disk,
simplifying a lot of the object serialization worries. And unlike loose
objects, serializing pack creation IO isn't going to be a performance
killer.
Signed-off-by: Linus Torvalds <torvalds@linux-foundation.org>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
The provided name argument is always constant and valid in every
caller's context, so no need to have an array of PATH_MAX chars to copy
it into when a simple pointer will do. Unfortunately that means getting
rid of wascally wabbits too.
The 'error' field is also unused.
Signed-off-by: Nicolas Pitre <nico@cam.org>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
The throughput display needs a delay period before accounting and
displaying anything. Yet it might be called after some amount of data
has already been transferred. The display of total data is therefore
accounted late and therefore smaller than the reality.
Let's call display_throughput() with an absolute amount of transferred
data instead of a relative number, and let the throughput code find the
relative amount of data by itself as needed. This way the displayed
total is always exact.
Signed-off-by: Nicolas Pitre <nico@cam.org>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
This one triggers only when git-pack-objects is called with
--all-progress and --stdout which is the combination used by
git-push.
Signed-off-by: Nicolas Pitre <nico@cam.org>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
Add config variables pack.compression and core.loosecompression ,
and switch --compression=level to pack-objects.
Loose objects will be compressed using core.loosecompression if set,
else core.compression if set, else Z_BEST_SPEED.
Packed objects will be compressed using --compression=level if seen,
else pack.compression if set, else core.compression if set,
else Z_DEFAULT_COMPRESSION. This is the "pack compression level".
Loose objects added to a pack undeltified will be recompressed
to the pack compression level if it is unequal to the current
loose compression level by the preceding rules, or if the loose
object was written while core.legacyheaders = true. Newly
deltified loose objects are always compressed to the current
pack compression level.
Previously packed objects added to a pack are recompressed
to the current pack compression level exactly when their
deltification status changes, since the previous pack data
cannot be reused.
In either case, the --no-reuse-object switch from the first
patch below will always force recompression to the current pack
compression level, instead of assuming the pack compression level
hasn't changed and pack data can be reused when possible.
This applies on top of the following patches from Nicolas Pitre:
[PATCH] allow for undeltified objects not to be reused
[PATCH] make "repack -f" imply "pack-objects --no-reuse-object"
Signed-off-by: Dana L. How <danahow@gmail.com>
Signed-off-by: Junio C Hamano <junkio@cox.net>
The most important optimization for performance when repacking is the
ability to reuse data from a previous pack as is and bypass any delta
or even SHA1 computation by simply copying the raw data from one pack
to another directly.
The problem with this is that any data corruption within a copied object
would go unnoticed and the new (repacked) pack would be self-consistent
with its own checksum despite containing a corrupted object. This is a
real issue that already happened at least once in the past.
In some attempt to prevent this, we validate the copied data by inflating
it and making sure no error is signaled by zlib. But this is still not
perfect as a significant portion of a pack content is made of object
headers and references to delta base objects which are not deflated and
therefore not validated when repacking actually making the pack data reuse
still not as safe as it could be.
Of course a full SHA1 validation could be performed, but that implies
full data inflating and delta replaying which is extremely costly, which
cost the data reuse optimization was designed to avoid in the first place.
So the best solution to this is simply to store a CRC32 of the raw pack
data for each object in the pack index. This way any object in a pack can
be validated before being copied as is in another pack, including header
and any other non deflated data.
Why CRC32 instead of a faster checksum like Adler32? Quoting Wikipedia:
Jonathan Stone discovered in 2001 that Adler-32 has a weakness for very
short messages. He wrote "Briefly, the problem is that, for very short
packets, Adler32 is guaranteed to give poor coverage of the available
bits. Don't take my word for it, ask Mark Adler. :-)" The problem is
that sum A does not wrap for short messages. The maximum value of A for
a 128-byte message is 32640, which is below the value 65521 used by the
modulo operation. An extended explanation can be found in RFC 3309,
which mandates the use of CRC32 instead of Adler-32 for SCTP, the
Stream Control Transmission Protocol.
In the context of a GIT pack, we have lots of small objects, especially
deltas, which are likely to be quite small and in a size range for which
Adler32 is dimed not to be sufficient. Another advantage of CRC32 is the
possibility for recovery from certain types of small corruptions like
single bit errors which are the most probable type of corruptions.
OK what this patch does is to compute the CRC32 of each object written to
a pack within pack-objects. It is not written to the index yet and it is
obviously not validated when reusing pack data yet either.
Signed-off-by: Nicolas Pitre <nico@cam.org>
Signed-off-by: Junio C Hamano <junkio@cox.net>
GCC's format __attribute__ is good for checking errors, especially
with -Wformat=2 parameter. This fixes most of the reported problems
against 2005-08-09 snapshot.
Also, make the writing of the SHA1 as a end-header be conditional: not
every user will necessarily want to write the SHA1 to the file itself,
even though current users do (but we migh end up using the same helper
functions for the object files themselves, that don't do this).
This also makes the packed index file contain the SHA1 of the packed
data file at the end (just before its own SHA1). That way you can
validate the pairing of the two if you want to.
We want to be able to check their integrity later, and putting the
sha1-sum of the contents at the end is a good thing. The writing
routines are generic, so we could try to re-use them for the index file,
instead of having the same logic duplicated.
Update unpack-objects to know about the extra 20 bytes at the end
of the index.
