diff --git a/editor/editor_export.cpp b/editor/editor_export.cpp
index 716ead9afcaa..25594bf7c808 100644
--- a/editor/editor_export.cpp
+++ b/editor/editor_export.cpp
@@ -90,6 +90,19 @@ Ref<EditorExportPlatform> EditorExportPreset::get_platform() const {
 	return platform;
 }
 
+void EditorExportPreset::update_files_to_export() {
+	Vector<String> to_remove;
+	for (Set<String>::Element *E = selected_files.front(); E; E = E->next()) {
+		if (!FileAccess::exists(E->get())) {
+			to_remove.push_back(E->get());
+		}
+	}
+	for (int i = 0; i < to_remove.size(); ++i) {
+		selected_files.erase(to_remove[i]);
+	}
+	EditorExport::singleton->save_presets();
+}
+
 Vector<String> EditorExportPreset::get_files_to_export() const {
 	Vector<String> files;
 	for (Set<String>::Element *E = selected_files.front(); E; E = E->next()) {
@@ -1298,7 +1311,11 @@ void EditorExport::load_config() {
 			Vector<String> files = config->get_value(section, "export_files");
 
 			for (int i = 0; i < files.size(); i++) {
-				preset->add_export_file(files[i]);
+				if (!FileAccess::exists(files[i])) {
+					preset->remove_export_file(files[i]);
+				} else {
+					preset->add_export_file(files[i]);
+				}
 			}
 		}
 
diff --git a/editor/editor_export.h b/editor/editor_export.h
index 4978b392485a..8ad8326f10c3 100644
--- a/editor/editor_export.h
+++ b/editor/editor_export.h
@@ -94,6 +94,8 @@ public:
 
 	bool has(const StringName &p_property) const { return values.has(p_property); }
 
+	void update_files_to_export();
+
 	Vector<String> get_files_to_export() const;
 
 	void add_export_file(const String &p_path);
diff --git a/editor/project_export.cpp b/editor/project_export.cpp
index e5372a5d47d9..c53a59604a9b 100644
--- a/editor/project_export.cpp
+++ b/editor/project_export.cpp
@@ -163,6 +163,7 @@ void ProjectExportDialog::_update_presets() {
 		if (preset->is_runnable()) {
 			name += " (" + TTR("Runnable") + ")";
 		}
+		preset->update_files_to_export();
 		presets->add_item(name, preset->get_platform()->get_logo());
 	}