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388 commits

Author SHA1 Message Date
Junio C Hamano 32dc15dec1 Merge branch 'jt/batch-fetch-blobs-in-diff'
While running "git diff" in a lazy clone, we can upfront know which
missing blobs we will need, instead of waiting for the on-demand
machinery to discover them one by one.  Aim to achieve better
performance by batching the request for these promised blobs.

* jt/batch-fetch-blobs-in-diff:
  diff: batch fetching of missing blobs
  sha1-file: support OBJECT_INFO_FOR_PREFETCH
2019-04-25 16:41:19 +09:00
Junio C Hamano 4a3ed2bec6 Merge branch 'nd/checkout-m'
"git checkout -m <other>" was about carrying the differences
between HEAD and the working-tree files forward while checking out
another branch, and ignored the differences between HEAD and the
index.  The command has been taught to abort when the index and the
HEAD are different.

* nd/checkout-m:
  checkout: prevent losing staged changes with --merge
  read-tree: add --quiet
  unpack-trees: rename "gently" flag to "quiet"
  unpack-trees: keep gently check inside add_rejected_path
2019-04-25 16:41:14 +09:00
Junio C Hamano 4284497396 Merge branch 'jk/unused-params-even-more'
Code cleanup.

* jk/unused-params-even-more:
  parse_opt_ref_sorting: always use with NONEG flag
  pretty: drop unused strbuf from parse_padding_placeholder()
  pretty: drop unused "type" parameter in needs_rfc2047_encoding()
  parse-options: drop unused ctx parameter from show_gitcomp()
  fetch_pack(): drop unused parameters
  report_path_error(): drop unused prefix parameter
  unpack-trees: drop unused error_type parameters
  unpack-trees: drop name_entry from traverse_by_cache_tree()
  test-date: drop unused "now" parameter from parse_dates()
  update-index: drop unused prefix_length parameter from do_reupdate()
  log: drop unused "len" from show_tagger()
  log: drop unused rev_info from early output
  revision: drop some unused "revs" parameters
2019-04-25 16:41:12 +09:00
Junio C Hamano 5795a75f9b Merge branch 'bp/post-index-change-hook'
A new hook "post-index-change" is called when the on-disk index
file changes, which can help e.g. a virtualized working tree
implementation.

* bp/post-index-change-hook:
  read-cache: add post-index-change hook
2019-04-25 16:41:11 +09:00
Jonathan Tan 0f4a4fb1c4 sha1-file: support OBJECT_INFO_FOR_PREFETCH
Teach oid_object_info_extended() to support a new flag that inhibits
fetching of missing objects. This is equivalent to setting
fetch_is_missing to 0, calling oid_object_info_extended(), then setting
fetch_if_missing to whatever it was before. Update unpack-trees.c to use
this new flag instead of repeatedly setting fetch_if_missing.

This new flag complicates things slightly in that there are now 2 ways
to do the same thing. But this eliminates the need to repeatedly set a
global variable, and more importantly, allows prefetching to be done in
parallel (in the future); hence, this patch.

Signed-off-by: Jonathan Tan <jonathantanmy@google.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2019-04-01 15:47:15 +09:00
Nguyễn Thái Ngọc Duy b165fac8c1 unpack-trees: rename "gently" flag to "quiet"
The gently flag was added in 17e4642667 (Add flag to make unpack_trees()
not print errors. - 2008-02-07) to suppress error messages. The name
"gently" does not quite express that. Granted, being quiet is gentle but
it could mean not performing some other actions. Rename the flag to
"quiet" to be more on point.

Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2019-03-24 21:35:34 +09:00
Nguyễn Thái Ngọc Duy 191e9d2c2d unpack-trees: keep gently check inside add_rejected_path
This basically follows the footsteps of 6a143aa2b2 (checkout -m:
attempt merge when deletion of path was staged - 2014-08-12) where
there gently check is moved inside reject_merge() so that callers do
not accidentally forget it.

add_rejected_path() has the same usage pattern. All call sites check
gently first, then decide to call add_rejected_path() if needed. Move
the check inside.

Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2019-03-24 21:35:34 +09:00
Nguyễn Thái Ngọc Duy ab5af825db unpack-trees: fix oneway_merge accidentally carry over stage index
Phillip found out that 'git checkout -f <branch>' does not restore
conflict/unmerged files correctly. All tracked files should be taken
from <branch> and all non-zero stages removed. Most of this is true,
except that the final file could be in stage one instead of zero.

"checkout -f" (among other commands) does this with one-way merge, which
is supposed to take stat info from the index and everything else from
the given tree. The add_entry(.., old, ...) call in oneway_merge()
though will keep stage index from the index.

This is normally not a problem if the entry from the index is
normal (stage #0). But if there is a conflict, stage #0 does not exist
and we'll get stage #1 entry as "old" variable, which gets recorded in
the final index. Fix it by clearing stage mask.

This bug probably comes from b5b425074e (git-read-tree: make one-way
merge also honor the "update" flag, 2005-06-07). Before this commit, we
may create the final ("dst") index entry from the one in index, but we
do clear CE_STAGEMASK.

I briefly checked two- and three-way merge functions. I think we don't
have the same problem in those.

Reported-by: Phillip Wood <phillip.wood@dunelm.org.uk>
Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2019-03-21 12:06:28 +09:00
Jeff King df351c6e67 unpack-trees: drop unused error_type parameters
The verify_clean_subdirectory() helper takes an error_type parameter
from the caller, but doesn't actually use it. Instead, when it calls
add_rejected_path() it passes NOT_UPTODATE_DIR, its own custom error
type which is more specific than what the caller provides. Likewise for
verify_clean_submodule(), which always passes WOULD_LOSE_SUBMODULE.

Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2019-03-20 18:34:09 +09:00
Jeff King 664296985c unpack-trees: drop name_entry from traverse_by_cache_tree()
We pull the names from the existing index rather than the tree entry,
which is after all the point of this function. Let's drop the unused
"names" parameter.

Note that we leave the "nr_names" parameter, as it tells us how many
trees we are traversing (and thus how many index stages to set up).

Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2019-03-20 18:34:09 +09:00
Junio C Hamano 7d0c1f4556 Merge branch 'tg/checkout-no-overlay'
"git checkout --no-overlay" can be used to trigger a new mode of
checking out paths out of the tree-ish, that allows paths that
match the pathspec that are in the current index and working tree
and are not in the tree-ish.

* tg/checkout-no-overlay:
  revert "checkout: introduce checkout.overlayMode config"
  checkout: introduce checkout.overlayMode config
  checkout: introduce --{,no-}overlay option
  checkout: factor out mark_cache_entry_for_checkout function
  checkout: clarify comment
  read-cache: add invalidate parameter to remove_marked_cache_entries
  entry: support CE_WT_REMOVE flag in checkout_entry
  entry: factor out unlink_entry function
  move worktree tests to t24*
2019-03-07 09:59:51 +09:00
Ben Peart 1956ecd0ab read-cache: add post-index-change hook
Add a post-index-change hook that is invoked after the index is written in
do_write_locked_index().

This hook is meant primarily for notification, and cannot affect
the outcome of git commands that trigger the index write.

The hook is passed a flag to indicate whether the working directory was
updated or not and a flag indicating if a skip-worktree bit could have
changed.  These flags enable the hook to optimize its response to the
index change notification.

Signed-off-by: Ben Peart <benpeart@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2019-02-15 11:00:33 -08:00
Junio C Hamano 7589e63648 Merge branch 'nd/the-index-final'
The assumption to work on the single "in-core index" instance has
been reduced from the library-ish part of the codebase.

* nd/the-index-final:
  cache.h: flip NO_THE_INDEX_COMPATIBILITY_MACROS switch
  read-cache.c: remove the_* from index_has_changes()
  merge-recursive.c: remove implicit dependency on the_repository
  merge-recursive.c: remove implicit dependency on the_index
  sha1-name.c: remove implicit dependency on the_index
  read-cache.c: replace update_index_if_able with repo_&
  read-cache.c: kill read_index()
  checkout: avoid the_index when possible
  repository.c: replace hold_locked_index() with repo_hold_locked_index()
  notes-utils.c: remove the_repository references
  grep: use grep_opt->repo instead of explict repo argument
2019-02-06 22:05:23 -08:00
Junio C Hamano 371820d5f1 Merge branch 'bc/tree-walk-oid'
The code to walk tree objects has been taught that we may be
working with object names that are not computed with SHA-1.

* bc/tree-walk-oid:
  cache: make oidcpy always copy GIT_MAX_RAWSZ bytes
  tree-walk: store object_id in a separate member
  match-trees: use hashcpy to splice trees
  match-trees: compute buffer offset correctly when splicing
  tree-walk: copy object ID before use
2019-01-29 12:47:56 -08:00
Nguyễn Thái Ngọc Duy f8adbec9fe cache.h: flip NO_THE_INDEX_COMPATIBILITY_MACROS switch
By default, index compat macros are off from now on, because they
could hide the_index dependency.

Only those in builtin can use it.

Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2019-01-24 11:55:06 -08:00
brian m. carlson ea82b2a085 tree-walk: store object_id in a separate member
When parsing a tree, we read the object ID directly out of the tree
buffer. This is normally fine, but such an object ID cannot be used with
oidcpy, which copies GIT_MAX_RAWSZ bytes, because if we are using SHA-1,
there may not be that many bytes to copy.

Instead, store the object ID in a separate struct member. Since we can
no longer efficiently compute the path length, store that information as
well in struct name_entry. Ensure we only copy the object ID into the
new buffer if the path length is nonzero, as some callers will pass us
an empty path with no object ID following it, and we will not want to
read past the end of the buffer.

Signed-off-by: brian m. carlson <sandals@crustytoothpaste.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2019-01-15 09:57:41 -08:00
Junio C Hamano 4084df42c2 Merge branch 'nd/checkout-noisy'
"git checkout [<tree-ish>] path..." learned to report the number of
paths that have been checked out of the index or the tree-ish,
which gives it the same degree of noisy-ness as the case in which
the command checks out a branch.

* nd/checkout-noisy:
  t0027: squelch checkout path run outside test_expect_* block
  checkout: print something when checking out paths
2019-01-14 15:29:29 -08:00
Junio C Hamano d6f05a435f Merge branch 'nd/attr-pathspec-in-tree-walk'
The traversal over tree objects has learned to honor
":(attr:label)" pathspec match, which has been implemented only for
enumerating paths on the filesystem.

* nd/attr-pathspec-in-tree-walk:
  tree-walk: support :(attr) matching
  dir.c: move, rename and export match_attrs()
  pathspec.h: clean up "extern" in function declarations
  tree-walk.c: make tree_entry_interesting() take an index
  tree.c: make read_tree*() take 'struct repository *'
2019-01-14 15:29:28 -08:00
Thomas Gummerer 6fdc205722 read-cache: add invalidate parameter to remove_marked_cache_entries
When marking cache entries for removal, and later removing them all at
once using 'remove_marked_cache_entries()', cache entries currently
have to be invalidated manually in the cache tree and in the untracked
cache.

Add an invalidate flag to the function.  With the flag set, the
function will take care of invalidating the path in the cache tree and
in the untracked cache.

Note that the current callsites already do the invalidation properly
in other places, so we're just passing 0 from there to keep the status
quo.

This will be useful in a subsequent commit.

Signed-off-by: Thomas Gummerer <t.gummerer@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2019-01-02 15:28:05 -08:00
Thomas Gummerer b702dd12d5 entry: factor out unlink_entry function
Factor out the 'unlink_entry()' function from unpack-trees.c to
entry.c.  It will be used in other places as well in subsequent
steps.

As it's no longer a static function, also move the documentation to
the header file to make it more discoverable.

Signed-off-by: Thomas Gummerer <t.gummerer@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2019-01-02 15:28:05 -08:00
Nguyễn Thái Ngọc Duy 67022e0214 tree-walk.c: make tree_entry_interesting() take an index
In order to support :(attr) when matching pathspec on a tree,
tree_entry_interesting() needs to take an index (because
git_check_attr() needs it). This is the preparation step for it. This
also makes it clearer what index we fall back to when looking up
attributes during an unpack-trees operation: the source index.

This also fixes revs->pruning.repo initialization that should have
been done in 2abf350385 (revision.c: remove implicit dependency on
the_index - 2018-09-21). Without it, skip_uninteresting() will
dereference a NULL pointer through this call chain

  get_revision(revs)
  get_revision_internal
  get_revision_1
  try_to_simplify_commit
  rev_compare_tree
  diff_tree_oid(..., &revs->pruning)
  ll_diff_tree_oid
  diff_tree_paths
  ll_diff_tree
  skip_uninteresting

Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-11-19 10:50:33 +09:00
Nguyễn Thái Ngọc Duy 0f086e6dca checkout: print something when checking out paths
One of the problems with "git checkout" is that it does so many
different things and could confuse people specially when we fail to
handle ambiguation correctly.

One way to help with that is tell the user what sort of operation is
actually carried out. When switching branches, we always print
something unless --quiet, either

 - "HEAD is now at ..."
 - "Reset branch ..."
 - "Already on ..."
 - "Switched to and reset ..."
 - "Switched to a new branch ..."
 - "Switched to branch ..."

Checking out paths however is silent. Print something so that if we
got the user intention wrong, they won't waste too much time to find
that out. For the remaining cases of checkout we now print either

 - "Checked out ... paths out of the index"
 - "Checked out ... paths out of <abbrev hash>"

Since the purpose of printing this is to help disambiguate. Only do it
when "--" is missing.

Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-11-14 15:10:35 +09:00
Nguyễn Thái Ngọc Duy c207e9e1f6 cache-tree.c: remove the_repository references
This case is more interesting than other boring "remove the_repo"
commits because while we need access to the object database, we cannot
simply use r->index because unpack-trees.c can operate on a temporary
index, not $GIT_DIR/index. Ideally we should be able to pass an object
database to lookup_tree() but that ship has sailed.

Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-11-12 14:50:06 +09:00
Carlo Marcelo Arenas Belón 07f967adb5 unpack-trees: avoid dead store for struct progress
it is unconditionally initialized a few lines below

Signed-off-by: Carlo Marcelo Arenas Belón <carenas@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-10-19 11:16:52 +09:00
Junio C Hamano ee99ba7afb Merge branch 'jt/lazy-object-fetch-fix'
The code to backfill objects in lazily cloned repository did not
work correctly, which has been corrected.

* jt/lazy-object-fetch-fix:
  fetch-object: set exact_oid when fetching
  fetch-object: unify fetch_object[s] functions
2018-09-24 10:30:52 -07:00
Junio C Hamano 769af0fd9e Merge branch 'jk/cocci'
spatch transformation to replace boolean uses of !hashcmp() to
newly introduced oideq() is added, and applied, to regain
performance lost due to support of multiple hash algorithms.

* jk/cocci:
  show_dirstat: simplify same-content check
  read-cache: use oideq() in ce_compare functions
  convert hashmap comparison functions to oideq()
  convert "hashcmp() != 0" to "!hasheq()"
  convert "oidcmp() != 0" to "!oideq()"
  convert "hashcmp() == 0" to hasheq()
  convert "oidcmp() == 0" to oideq()
  introduce hasheq() and oideq()
  coccinelle: use <...> for function exclusion
2018-09-17 13:53:57 -07:00
Junio C Hamano 7e794d0a3f Merge branch 'nd/unpack-trees-with-cache-tree'
The unpack_trees() API used in checking out a branch and merging
walks one or more trees along with the index.  When the cache-tree
in the index tells us that we are walking a tree whose flattened
contents is known (i.e. matches a span in the index), as linearly
scanning a span in the index is much more efficient than having to
open tree objects recursively and listing their entries, the walk
can be optimized, which is done in this topic.

* nd/unpack-trees-with-cache-tree:
  Document update for nd/unpack-trees-with-cache-tree
  cache-tree: verify valid cache-tree in the test suite
  unpack-trees: add missing cache invalidation
  unpack-trees: reuse (still valid) cache-tree from src_index
  unpack-trees: reduce malloc in cache-tree walk
  unpack-trees: optimize walking same trees with cache-tree
  unpack-trees: add performance tracing
  trace.h: support nested performance tracing
2018-09-17 13:53:53 -07:00
Junio C Hamano c2407322b6 Merge branch 'nd/clone-case-smashing-warning'
Running "git clone" against a project that contain two files with
pathnames that differ only in cases on a case insensitive
filesystem would result in one of the files lost because the
underlying filesystem is incapable of holding both at the same
time.  An attempt is made to detect such a case and warn.

* nd/clone-case-smashing-warning:
  clone: report duplicate entries on case-insensitive filesystems
2018-09-17 13:53:47 -07:00
Jonathan Tan 8708ca09a6 fetch-object: unify fetch_object[s] functions
There are fetch_object() and fetch_objects() helpers in
fetch-object.h; as the latter takes "struct oid_array",
the former cannot be made into a thin wrapper around the
latter without an extra allocation and set-up cost.

Update fetch_objects() to take an array of "struct object_id"
and number of elements in it as separate parameters, remove
fetch_object(), and adjust all existing callers of these
functions to use the new fetch_objects().

Signed-off-by: Jonathan Tan <jonathantanmy@google.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-09-13 13:56:19 -07:00
Jeff King 4a7e27e957 convert "oidcmp() == 0" to oideq()
Using the more restrictive oideq() should, in the long run,
give the compiler more opportunities to optimize these
callsites. For now, this conversion should be a complete
noop with respect to the generated code.

The result is also perhaps a little more readable, as it
avoids the "zero is equal" idiom. Since it's so prevalent in
C, I think seasoned programmers tend not to even notice it
anymore, but it can sometimes make for awkward double
negations (e.g., we can drop a few !!oidcmp() instances
here).

This patch was generated almost entirely by the included
coccinelle patch. This mechanical conversion should be
completely safe, because we check explicitly for cases where
oidcmp() is compared to 0, which is what oideq() is doing
under the hood. Note that we don't have to catch "!oidcmp()"
separately; coccinelle's standard isomorphisms make sure the
two are treated equivalently.

I say "almost" because I did hand-edit the coccinelle output
to fix up a few style violations (it mostly keeps the
original formatting, but sometimes unwraps long lines).

Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-08-29 11:32:49 -07:00
Nguyễn Thái Ngọc Duy 5f4436a721 Document update for nd/unpack-trees-with-cache-tree
Fix an incorrect comment in the new code added in b4da37380b
(unpack-trees: optimize walking same trees with cache-tree -
2018-08-18) and document about the new test variable that is enabled
by default in test-lib.sh in 4592e6080f (cache-tree: verify valid
cache-tree in the test suite - 2018-08-18)

Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-08-27 12:26:17 -07:00
Nguyễn Thái Ngọc Duy 4592e6080f cache-tree: verify valid cache-tree in the test suite
This makes sure that cache-tree is consistent with the index. The main
purpose is to catch potential problems by saving the index in
unpack_trees() but the line in write_index() would also help spot
missing invalidation in other code.

Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-08-18 09:47:46 -07:00
Nguyễn Thái Ngọc Duy 5697ca9aa5 unpack-trees: add missing cache invalidation
Any changes to the output index should be (confusingly) marked in the
source index with invalidate_ce_path(). This is used to make sure we
still have valid untracked cache and cache-tree extensions in the end.

We do a pretty good job of invalidating except in two places.
verify_clean_subdirectory() is part of verify_absent() and
verify_absent_sparse(). The former is usually called by merged_entry()
or directly in threeway_merge(). The latter is obviously used by
sparse checkout.

In these three call sites, only merged_entry() follows up with
invalidate_ce_path(). The other two don't, but they should not trigger
this ce removal because this is about D/F conflicts [1]. But let's be
safe and invalidate_ce_path() here as well.

The second place is keep_entry() which is also used by threeway_merge()
to keep higher stage entries. In order to reuse cache-tree we need to
invalidate these paths as well. It's not a problem in the past because
whenever a higher stage entry is present, cache-tree will not be
created [2]. Now we salvage cache-tree even when higher stage entries
are present, we need more invalidation.

[1] c81935348b (Fix switching to a branch with D/F when current branch
    has file D. - 2007-03-15)

[2] This is probably too strict. We should be able to create and save
    cache-tree for the directories that do not have conflict entries
    in cache_tree_update(). And this becomes more important when
    cache-tree plays bigger role in terms of performance.

Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-08-18 09:47:46 -07:00
Nguyễn Thái Ngọc Duy 836ef2b69f unpack-trees: reuse (still valid) cache-tree from src_index
We do n-way merge by walking the source index and n trees at the same
time and add merge results to a new temporary index called o->result.
The merge result for any given path could be either

- keep_entry(): same old index entry in o->src_index is reused
- merged_entry(): either a new entry is added, or an existing one updated
- deleted_entry(): one entry from o->src_index is removed

For some reason [1] we keep making sure that the source index's
cache-tree is still valid if used by o->result: for all those
merged/deleted entries, we invalidate the same path in o->src_index,
so only cache-trees covering the "keep_entry" parts remain good.

Because of this, the cache-tree from o->src_index can be perfectly
reused in o->result. And in fact we already rely on this logic to
reuse untracked cache in edf3b90553 (unpack-trees: preserve index
extensions - 2017-05-08). Move the cache-tree to o->result before
doing cache_tree_update() to reduce hashing cost.

Since cache_tree_update() has risen up as one of the most expensive
parts in unpack_trees() after the last few patches. This does help
reduce unpack_trees() time significantly (on webkit.git):

    before       after
  --------------------------------------------------------------------
    0.080394752  0.051258167 s:  read cache .git/index
    0.216010838  0.212106298 s:  preload index
    0.008534301  0.280521764 s:  refresh index
    0.251992198  0.218160442 s:   traverse_trees
    0.377031383  0.374948191 s:   check_updates
    0.372768105  0.037040114 s:   cache_tree_update
    1.045887251  0.672031609 s:  unpack_trees
    0.314983512  0.317456290 s:  write index, changed mask = 2e
    0.062572653  0.038382654 s:    traverse_trees
    0.000022544  0.000042731 s:    check_updates
    0.073795585  0.050930053 s:   unpack_trees
    0.073807557  0.051099735 s:  diff-index
    1.938191592  1.614241153 s: git command: git checkout -

[1] I'm pretty sure the reason is an oversight in 34110cd4e3 (Make
    'unpack_trees()' have a separate source and destination index -
    2008-03-06). That patch aims to _not_ update the source index at
    all. The invalidation should have been done on o->result in that
    patch. But then there was no cache-tree on o->result even then so
    it's pointless to do so.

Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-08-18 09:47:46 -07:00
Nguyễn Thái Ngọc Duy f1e11c6510 unpack-trees: reduce malloc in cache-tree walk
This is a micro optimization that probably only shines on repos with
deep directory structure. Instead of allocating and freeing a new
cache_entry in every iteration, we reuse the last one and only update
the parts that are new each iteration.

Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-08-18 09:47:46 -07:00
Nguyễn Thái Ngọc Duy b4da37380b unpack-trees: optimize walking same trees with cache-tree
In order to merge one or many trees with the index, unpack-trees code
walks multiple trees in parallel with the index and performs n-way
merge. If we find out at start of a directory that all trees are the
same (by comparing OID) and cache-tree happens to be available for
that directory as well, we could avoid walking the trees because we
already know what these trees contain: it's flattened in what's called
"the index".

The upside is of course a lot less I/O since we can potentially skip
lots of trees (think subtrees). We also save CPU because we don't have
to inflate and apply the deltas. The downside is of course more
fragile code since the logic in some functions are now duplicated
elsewhere.

"checkout -" with this patch on webkit.git (275k files):

    baseline      new
  --------------------------------------------------------------------
    0.056651714   0.080394752 s:  read cache .git/index
    0.183101080   0.216010838 s:  preload index
    0.008584433   0.008534301 s:  refresh index
    0.633767589   0.251992198 s:   traverse_trees
    0.340265448   0.377031383 s:   check_updates
    0.381884638   0.372768105 s:   cache_tree_update
    1.401562947   1.045887251 s:  unpack_trees
    0.338687914   0.314983512 s:  write index, changed mask = 2e
    0.411927922   0.062572653 s:    traverse_trees
    0.000023335   0.000022544 s:    check_updates
    0.423697246   0.073795585 s:   unpack_trees
    0.423708360   0.073807557 s:  diff-index
    2.559524127   1.938191592 s: git command: git checkout -

Another measurement from Ben's running "git checkout" with over 500k
trees (on the whole series):

    baseline        new
  ----------------------------------------------------------------------
    0.535510167     0.556558733     s: read cache .git/index
    0.3057373       0.3147105       s: initialize name hash
    0.0184082       0.023558433     s: preload index
    0.086910967     0.089085967     s: refresh index
    7.889590767     2.191554433     s: unpack trees
    0.120760833     0.131941267     s: update worktree after a merge
    2.2583504       2.572663167     s: repair cache-tree
    0.8916137       0.959495233     s: write index, changed mask = 28
    3.405199233     0.2710663       s: unpack trees
    0.000999667     0.0021554       s: update worktree after a merge
    3.4063306       0.273318333     s: diff-index
    16.9524923      9.462943133     s: git command: git.exe checkout

This command calls unpack_trees() twice, the first time on 2way merge
and the second 1way merge. In both times, "unpack trees" time is
reduced to one third. Overall time reduction is not that impressive of
course because index operations take a big chunk. And there's that
repair cache-tree line.

PS. A note about cache-tree invalidation and the use of it in this
code.

We do invalidate cache-tree in _source_ index when we add new entries
to the (temporary) "result" index. But we also use the cache-tree from
source index in this optimization. Does this mean we end up having no
cache-tree in the source index to activate this optimization?

The answer is twisted: the order of finding a good cache-tree and
invalidating it matters. In this case we check for a good cache-tree
first in all_trees_same_as_cache_tree(), then we start to merge things
and potentially invalidate that same cache-tree in the process. Since
cache-tree invalidation happens after the optimization kicks in, we're
still good. But we may lose that cache-tree at the very first
call_unpack_fn() call in traverse_by_cache_tree().

Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-08-18 09:47:46 -07:00
Nguyễn Thái Ngọc Duy 0d1ed5963d unpack-trees: add performance tracing
We're going to optimize unpack_trees() a bit in the following
patches. Let's add some tracing to measure how long it takes before
and after. This is the baseline ("git checkout -" on webkit.git, 275k
files on worktree)

    performance: 0.056651714 s:  read cache .git/index
    performance: 0.183101080 s:  preload index
    performance: 0.008584433 s:  refresh index
    performance: 0.633767589 s:   traverse_trees
    performance: 0.340265448 s:   check_updates
    performance: 0.381884638 s:   cache_tree_update
    performance: 1.401562947 s:  unpack_trees
    performance: 0.338687914 s:  write index, changed mask = 2e
    performance: 0.411927922 s:    traverse_trees
    performance: 0.000023335 s:    check_updates
    performance: 0.423697246 s:   unpack_trees
    performance: 0.423708360 s:  diff-index
    performance: 2.559524127 s: git command: git checkout -

Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-08-18 09:47:46 -07:00
Duy Nguyen b878579ae7 clone: report duplicate entries on case-insensitive filesystems
Paths that only differ in case work fine in a case-sensitive
filesystems, but if those repos are cloned in a case-insensitive one,
you'll get problems. The first thing to notice is "git status" will
never be clean with no indication what exactly is "dirty".

This patch helps the situation a bit by pointing out the problem at
clone time. Even though this patch talks about case sensitivity, the
patch makes no assumption about folding rules by the filesystem. It
simply observes that if an entry has been already checked out at clone
time when we're about to write a new path, some folding rules are
behind this.

In the case that we can't rely on filesystem (via inode number) to do
this check, fall back to fspathcmp() which is not perfect but should
not give false positives.

This patch is tested with vim-colorschemes and Sublime-Gitignore
repositories on a JFS partition with case insensitive support on
Linux.

Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-08-17 12:10:37 -07:00
Nguyễn Thái Ngọc Duy c4500e251f attr: remove index from git_attr_set_direction()
Since attr checking API now take the index, there's no need to set an
index in advance with this call. Most call sites are straightforward
because they either pass the_index or NULL (which defaults back to
the_index previously). There's only one suspicious call site in
unpack-trees.c where it sets a different index.

This code in unpack-trees is about to check out entries from the
new/temporary index after merging is done in it. The attributes will
be used by entry.c code to do crlf conversion if needed. entry.c now
respects struct checkout's istate field, and this field is correctly
set in unpack-trees.c, there should be no regression from this change.

Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-08-13 14:14:43 -07:00
Nguyễn Thái Ngọc Duy c7f3259d0d unpack-trees: avoid the_index in verify_absent()
Both functions that are updated in this commit are called by
verify_absent(), which is part of the "unpack-trees" operation that is
supposed to work on any index file specified by the caller. Thanks to
Brandon [1] [2], an implicit dependency on the_index is exposed. This
commit fixes it.

In both functions, it makes sense to use src_index to check for
exclusion because it's almost unchanged and should give us the same
outcome as if running the exclude check before the unpack.

It's "almost unchanged" because we do invalidate cache-tree and
untracked cache in the source index. But this should not affect how
exclude machinery uses the index: to see if a file is tracked, and to
read a blob from the index instead of worktree if it's marked
skip-worktree (i.e. it's not available in worktree)

[1] a0bba65b10 (dir: convert is_excluded to take an index - 2017-05-05
[2] 2c1eb10454 (dir: convert read_directory to take an index - 2017-05-05)

Helped-by: Elijah Newren <newren@gmail.com>
Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-08-13 14:14:43 -07:00
Nguyễn Thái Ngọc Duy 27c82fb3b4 unpack-trees: convert clear_ce_flags* to avoid the_index
Prior to fba92be8f7, this code implicitly (and incorrectly) assumes
the_index when running the exclude machinery. fba92be8f7 helps show
this problem clearer because unpack-trees operation is supposed to
work on whatever index the caller specifies... not specifically
the_index.

Update the code to use "istate" argument that's originally from
mark_new_skip_worktree(). From the call sites, both in unpack_trees(),
you can see that this function works on two separate indexes:
o->src_index and o->result. The second mark_new_skip_worktree() so far
has incorecctly applied exclude rules on o->src_index instead of
o->result. It's unclear what is the consequences of this, but it's
definitely wrong.

[1] fba92be8f7 (dir: convert is_excluded_from_list to take an index -
    2017-05-05)

Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-08-13 14:14:43 -07:00
Nguyễn Thái Ngọc Duy 86016ec304 unpack-trees: don't shadow global var the_index
This function mark_new_skip_worktree() has an argument named the_index
which is also the name of a global variable. While they have different
types (the global the_index is not a pointer) mistakes can easily
happen and it's also confusing for readers. Rename the function
argument to something other than the_index.

Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-08-13 14:14:43 -07:00
Nguyễn Thái Ngọc Duy 383480ba4f unpack-trees: add a note about path invalidation
Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-08-13 14:14:43 -07:00
Junio C Hamano ae533c4a92 Merge branch 'jm/cache-entry-from-mem-pool'
For a large tree, the index needs to hold many cache entries
allocated on heap.  These cache entries are now allocated out of a
dedicated memory pool to amortize malloc(3) overhead.

* jm/cache-entry-from-mem-pool:
  block alloc: add validations around cache_entry lifecyle
  block alloc: allocate cache entries from mem_pool
  mem-pool: fill out functionality
  mem-pool: add life cycle management functions
  mem-pool: only search head block for available space
  block alloc: add lifecycle APIs for cache_entry structs
  read-cache: teach make_cache_entry to take object_id
  read-cache: teach refresh_cache_entry to take istate
2018-08-02 15:30:43 -07:00
Junio C Hamano 284b444932 Merge branch 'mk/merge-in-sparse-checkout'
"git reset --merge" (hence "git merge ---abort") and "git reset --hard"
had trouble working correctly in a sparsely checked out working
tree after a conflict, which has been corrected.

* mk/merge-in-sparse-checkout:
  unpack-trees: do not fail reset because of unmerged skipped entry
2018-07-24 14:50:48 -07:00
Junio C Hamano 00624d608c Merge branch 'sb/object-store-grafts'
The conversion to pass "the_repository" and then "a_repository"
throughout the object access API continues.

* sb/object-store-grafts:
  commit: allow lookup_commit_graft to handle arbitrary repositories
  commit: allow prepare_commit_graft to handle arbitrary repositories
  shallow: migrate shallow information into the object parser
  path.c: migrate global git_path_* to take a repository argument
  cache: convert get_graft_file to handle arbitrary repositories
  commit: convert read_graft_file to handle arbitrary repositories
  commit: convert register_commit_graft to handle arbitrary repositories
  commit: convert commit_graft_pos() to handle arbitrary repositories
  shallow: add repository argument to is_repository_shallow
  shallow: add repository argument to check_shallow_file_for_update
  shallow: add repository argument to register_shallow
  shallow: add repository argument to set_alternate_shallow_file
  commit: add repository argument to lookup_commit_graft
  commit: add repository argument to prepare_commit_graft
  commit: add repository argument to read_graft_file
  commit: add repository argument to register_commit_graft
  commit: add repository argument to commit_graft_pos
  object: move grafts to object parser
  object-store: move object access functions to object-store.h
2018-07-18 12:20:28 -07:00
Max Kirillov b33fdfc34c unpack-trees: do not fail reset because of unmerged skipped entry
After modify/delete merge conflict happens in a file skipped by sparse
checkout, "git reset --merge", which implements the "--abort" actions,
and "git reset --hard" fail with message "Entry * not uptodate. Cannot
update sparse checkout."

As explained in [1], the up-to-date checker mistakenly treats conflicted
entry which does not exist in HEAD as still skipped by sparse checkout.

Use the fix suggested in [1]. Also, add test case which verifies the
issue is fixed.

[1] https://public-inbox.org/git/20180616051444.GA29754@duynguyen.home/

Signed-off-by: Duy Nguyen <pclouds@gmail.com>
Signed-off-by: Max Kirillov <max@max630.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-07-11 09:35:41 -07:00
Jameson Miller 8e72d67529 block alloc: allocate cache entries from mem_pool
When reading large indexes from disk, a portion of the time is
dominated in malloc() calls. This can be mitigated by allocating a
large block of memory and manage it ourselves via memory pools.

This change moves the cache entry allocation to be on top of memory
pools.

Design:

The index_state struct will gain a notion of an associated memory_pool
from which cache_entries will be allocated from. When reading in the
index from disk, we have information on the number of entries and
their size, which can guide us in deciding how large our initial
memory allocation should be. When an index is discarded, the
associated memory_pool will be discarded as well - so the lifetime of
a cache_entry is tied to the lifetime of the index_state that it was
allocated for.

In the case of a Split Index, the following rules are followed. 1st,
some terminology is defined:

Terminology:
  - 'the_index': represents the logical view of the index

  - 'split_index': represents the "base" cache entries. Read from the
    split index file.

'the_index' can reference a single split_index, as well as
cache_entries from the split_index. `the_index` will be discarded
before the `split_index` is.  This means that when we are allocating
cache_entries in the presence of a split index, we need to allocate
the entries from the `split_index`'s memory pool.  This allows us to
follow the pattern that `the_index` can reference cache_entries from
the `split_index`, and that the cache_entries will not be freed while
they are still being referenced.

Managing transient cache_entry structs:
Cache entries are usually allocated for an index, but this is not always
the case. Cache entries are sometimes allocated because this is the
type that the existing checkout_entry function works with. Because of
this, the existing code needs to handle cache entries associated with an
index / memory pool, and those that only exist transiently. Several
strategies were contemplated around how to handle this:

Chosen approach:
An extra field was added to the cache_entry type to track whether the
cache_entry was allocated from a memory pool or not. This is currently
an int field, as there are no more available bits in the existing
ce_flags bit field. If / when more bits are needed, this new field can
be turned into a proper bit field.

Alternatives:

1) Do not include any information about how the cache_entry was
allocated. Calling code would be responsible for tracking whether the
cache_entry needed to be freed or not.
  Pro: No extra memory overhead to track this state
  Con: Extra complexity in callers to handle this correctly.

The extra complexity and burden to not regress this behavior in the
future was more than we wanted.

2) cache_entry would gain knowledge about which mem_pool allocated it
  Pro: Could (potentially) do extra logic to know when a mem_pool no
       longer had references to any cache_entry
  Con: cache_entry would grow heavier by a pointer, instead of int

We didn't see a tangible benefit to this approach

3) Do not add any extra information to a cache_entry, but when freeing a
   cache entry, check if the memory exists in a region managed by existing
   mem_pools.
  Pro: No extra memory overhead to track state
  Con: Extra computation is performed when freeing cache entries

We decided tracking and iterating over known memory pool regions was
less desirable than adding an extra field to track this stae.

Signed-off-by: Jameson Miller <jamill@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-07-03 10:58:27 -07:00
Jameson Miller a849735bfb block alloc: add lifecycle APIs for cache_entry structs
It has been observed that the time spent loading an index with a large
number of entries is partly dominated by malloc() calls. This change
is in preparation for using memory pools to reduce the number of
malloc() calls made to allocate cahce entries when loading an index.

Add an API to allocate and discard cache entries, abstracting the
details of managing the memory backing the cache entries. This commit
does actually change how memory is managed - this will be done in a
later commit in the series.

This change makes the distinction between cache entries that are
associated with an index and cache entries that are not associated with
an index. A main use of cache entries is with an index, and we can
optimize the memory management around this. We still have other cases
where a cache entry is not persisted with an index, and so we need to
handle the "transient" use case as well.

To keep the congnitive overhead of managing the cache entries, there
will only be a single discard function. This means there must be enough
information kept with the cache entry so that we know how to discard
them.

A summary of the main functions in the API is:

make_cache_entry: create cache entry for use in an index. Uses specified
                  parameters to populate cache_entry fields.

make_empty_cache_entry: Create an empty cache entry for use in an index.
                        Returns cache entry with empty fields.

make_transient_cache_entry: create cache entry that is not used in an
                            index. Uses specified parameters to populate
                            cache_entry fields.

make_empty_transient_cache_entry: create cache entry that is not used in
                                  an index. Returns cache entry with
                                  empty fields.

discard_cache_entry: A single function that knows how to discard a cache
                     entry regardless of how it was allocated.

Signed-off-by: Jameson Miller <jamill@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-07-03 10:58:27 -07:00
Junio C Hamano e47dbece39 Merge branch 'ma/unpack-trees-free-msgs'
Leak plugging.

* ma/unpack-trees-free-msgs:
  unpack_trees_options: free messages when done
  argv-array: return the pushed string from argv_push*()
  merge-recursive: provide pair of `unpack_trees_{start,finish}()`
  merge: setup `opts` later in `checkout_fast_forward()`
2018-05-30 21:51:29 +09:00