Since e0fd51e1d7 (fsck: verify commit-graph, 2018-06-27), `fsck` runs
`git commit-graph verify` to check the integrity of any commit-graph(s).
Originally, the `git commit-graph verify` step would always print to
stdout/stderr, regardless of whether or not `fsck` was invoked with
`--[no-]progress` or not. But in 7371612255 (commit-graph: add
--[no-]progress to write and verify, 2019-08-26), the commit-graph
machinery learned the `--[no-]progress` option, though `fsck` was not
updated to pass this new flag (or not).
This led to seeing output from running `git fsck`, even with
`--no-progress` on repositories that have a commit-graph:
$ git.compile fsck --connectivity-only --no-progress --no-dangling
Verifying commits in commit graph: 100% (4356/4356), done.
Verifying commits in commit graph: 100% (131912/131912), done.
Ensure that `fsck` passes `--[no-]progress` as appropriate when calling
`git commit-graph verify`.
Signed-off-by: Taylor Blau <me@ttaylorr.com>
Acked-by: Derrick Stolee <derrickstolee@github.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
The commit_graph_generation() method used to report a value of
GENERATION_NUMBER_INFINITY if the commit_graph_data_slab had an instance
for the given commit but the graph_pos indicated the commit was not in
the commit-graph file.
However, an upcoming change will introduce the ability to set generation
values in-memory without writing the commit-graph file. Thus, we can no
longer trust 'graph_pos' to indicate whether or not the generation
member can be trusted.
Instead, trust the 'generation' member if the commit has a value in the
slab _and_ the 'generation' member is non-zero. Otherwise, treat it as
GENERATION_NUMBER_INFINITY.
This only makes a difference for a very old case for the commit-graph:
the very first Git release to write commit-graph files wrote zeroes in
the topological level positions. If we are parsing a commit-graph with
all zeroes, those commits will now appear to have
GENERATION_NUMBER_INFINITY (as if they were not parsed from the
commit-graph).
I attempted several variations to work around the need for providing an
uninitialized 'generation' member, but this was the best one I found. It
does require a change to a verification test in t5318 because it reports
a different error than the one about non-zero generation numbers.
Signed-off-by: Derrick Stolee <derrickstolee@github.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
Introduce the "subcommand" mode to parse-options API and update the
command line parser of Git commands with subcommands.
* sg/parse-options-subcommand: (23 commits)
remote: run "remote rm" argv through parse_options()
maintenance: add parse-options boilerplate for subcommands
pass subcommand "prefix" arguments to parse_options()
builtin/worktree.c: let parse-options parse subcommands
builtin/stash.c: let parse-options parse subcommands
builtin/sparse-checkout.c: let parse-options parse subcommands
builtin/remote.c: let parse-options parse subcommands
builtin/reflog.c: let parse-options parse subcommands
builtin/notes.c: let parse-options parse subcommands
builtin/multi-pack-index.c: let parse-options parse subcommands
builtin/hook.c: let parse-options parse subcommands
builtin/gc.c: let parse-options parse 'git maintenance's subcommands
builtin/commit-graph.c: let parse-options parse subcommands
builtin/bundle.c: let parse-options parse subcommands
parse-options: add support for parsing subcommands
parse-options: drop leading space from '--git-completion-helper' output
parse-options: clarify the limitations of PARSE_OPT_NODASH
parse-options: PARSE_OPT_KEEP_UNKNOWN only applies to --options
api-parse-options.txt: fix description of OPT_CMDMODE
t0040-parse-options: test parse_options() with various 'parse_opt_flags'
...
'git commit-graph' parses its subcommands with an if-else if
statement. parse-options has just learned to parse subcommands, so
let's use that facility instead, with the benefits of shorter code,
handling missing or unknown subcommands, and listing subcommands for
Bash completion.
Note that the functions implementing each subcommand only accept the
'argc' and '**argv' parameters, so add a (unused) '*prefix' parameter
to make them match the type expected by parse-options, and thus avoid
casting function pointers.
Signed-off-by: SZEDER Gábor <szeder.dev@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
There was a bug in the codepath to upgrade generation information
in commit-graph from v1 to v2 format, which has been corrected.
* tb/commit-graph-genv2-upgrade-fix:
commit-graph: fix corrupt upgrade from generation v1 to v2
commit-graph: introduce `repo_find_commit_pos_in_graph()`
t5318: demonstrate commit-graph generation v2 corruption
The previous commit demonstrates a bug where a commit-graph using
generation v2 could enter a state where one of the GDA2 values has its
most-significant bit set (indicating that its value should be read from
the extended offset table in the GDO2 chunk) without having a GDO2 chunk
to read from.
This results in the following error message being displayed to the
caller:
fatal: commit-graph requires overflow generation data but has none
This bug arises in the following scenario:
- We decide to write a commit-graph using generation number v2, and
decide (correctly) that no GDO2 chunk is necessary (e.g., because
all of the commiter date offsets are no larger than 2^31-1).
- The v2 generation numbers are stored in the `->generation` member of
the commit slab holding `struct commit_graph_data`'s.
- Later on, `load_commit_graph_info()` is called, overwriting the
v2 generation data in the aforementioned slab with any existing v1
generation data.
Then, when the commit-graph code goes to write the GDA2 chunk via
`write_graph_chunk_generation_data()`, we use the overwritten generation
v1 data in a place where we expect to use a v2 generation number:
offset = commit_graph_data_at(c)->generation - c->date;
...because `commit_graph_data_at(c)->generation` used to hold the v2
generation data, but it was overwritten to contain the v1 generation
number via `load_commit_graph_info()`.
If the `offset` computation above overflows the v2 generation number
max, then `write_graph_chunk_generation_data()` will update its count of
large offsets and write the marker accordingly:
if (offset > GENERATION_NUMBER_V2_OFFSET_MAX) {
offset = CORRECTED_COMMIT_DATE_OFFSET_OVERFLOW | num_generation_data_overflows;
num_generation_data_overflows++;
}
and reads will look for the GDO2 chunk containing the overflowing v2
generation number, *after* the commit-graph code decided that no such
chunk was necessary.
The main problem is that the slab containing `struct commit_graph_data`
has a dual purpose. It is used to hold data that we are about to write
to disk while generating a commit-graph, as well as hold data that was
read from an existing commit-graph.
When the two mix, namely when the result of reading the commit-graph has
a side-effect that mixes poorly with an in-progress commit-graph write,
we end up with corrupt data.
A complete fix might be to introduce a new slab that is used exclusively
for writing, and gate access between the two slabs based on context
provided by the caller (e.g., whether this computation is part of a
"read" or "write" operation).
But a more minimal fix addresses the only known path which overwrites
the slab data, which is `compute_bloom_filters()` ->
`get_or_compute_bloom_filter()` -> `load_commit_graph_info()` ->
`fill_commit_graph_info()` by avoiding the last call which clobbers the
data altogether.
This path only needs to learn the graph position of a given commit so
that it can be used in `load_bloom_filter_from_graph()`. By replacing
the last steps of the above with one that records the graph position
into a temporary variable which is then used to load the existing Bloom
data, we eliminate the clobbering, removing the corruption.
Signed-off-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
When upgrading a commit-graph using generation v1 to one using
generation v2, it is possible to force Git into a corrupt state where it
(incorrectly) believes that a GDO2 chunk is necessary, *after* deciding
not to write one.
This makes subsequent reads using the commit-graph produce the following
error message:
fatal: commit-graph requires overflow generation data but has none
Demonstrate this bug by increasing our test coverage to include a
minimal example of upgrading a commit-graph from generation v1 to v2.
The only notable components of this test are:
- The committer date of the commit is chosen carefully so that the
offset underflows when computed using a v1 generation number, but
would not overflow when using v2 generation numbers.
- The upgrade to generation number v2 must read in the v1 generation
numbers, which we can do by passing `--changed-paths`, which will
force the commit-graph internals to call `fill_commit_graph_info()`.
A future patch will squash this bug.
Reported-by: Jeff King <peff@peff.net>
Reproduced-by: Will Chandler <wfc@wfchandler.org>
Signed-off-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
Change those tests that assumed that a .git/info directory would be
created for them when writing .git/info/grafts to explicitly create
the directory.
Do this using the new "TEST_CREATE_REPO_NO_TEMPLATE" facility, and use
"mkdir" instead of "mkdir -p" to assert that we don't have the
.git/info already. An exception to this is the "with grafts" test in
"t6001-rev-list-graft.sh". There we're modifying our ".git" state in a
for-loop, in lieu of refactoring that more extensively let's use
"mkdir -p" there.
Signed-off-by: Ævar Arnfjörð Bjarmason <avarab@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
The 'read_generation_data' member of 'struct commit_graph' was
introduced by 1fdc383c5 (commit-graph: use generation v2 only if entire
chain does, 2021-01-16). The intention was to avoid using corrected
commit dates if not all layers of a commit-graph had that data stored.
The logic in validate_mixed_generation_chain() at that point incorrectly
initialized read_generation_data to 1 if and only if the tip
commit-graph contained the Corrected Commit Date chunk.
This was "fixed" in 448a39e65 (commit-graph: validate layers for
generation data, 2021-02-02) to validate that read_generation_data was
either non-zero for all layers, or it would set read_generation_data to
zero for all layers.
The problem here is that read_generation_data is not initialized to be
non-zero anywhere!
This change initializes read_generation_data immediately after the chunk
is parsed, so each layer will have its value present as soon as
possible.
The read_generation_data member is used in fill_commit_graph_info() to
determine if we should use the corrected commit date or the topological
levels stored in the Commit Data chunk. Due to this bug, all previous
versions of Git were defaulting to topological levels in all cases!
This can be measured with some performance tests. Using the Linux kernel
as a testbed, I generated a complete commit-graph containing corrected
commit dates and tested the 'new' version against the previous, 'old'
version.
First, rev-list with --topo-order demonstrates a 26% improvement using
corrected commit dates:
hyperfine \
-n "old" "$OLD_GIT rev-list --topo-order -1000 v3.6" \
-n "new" "$NEW_GIT rev-list --topo-order -1000 v3.6" \
--warmup=10
Benchmark 1: old
Time (mean ± σ): 57.1 ms ± 3.1 ms
Range (min … max): 52.9 ms … 62.0 ms 55 runs
Benchmark 2: new
Time (mean ± σ): 45.5 ms ± 3.3 ms
Range (min … max): 39.9 ms … 51.7 ms 59 runs
Summary
'new' ran
1.26 ± 0.11 times faster than 'old'
These performance improvements are due to the algorithmic improvements
given by walking fewer commits due to the higher cutoffs from corrected
commit dates.
However, this comes at a cost. The additional I/O cost of parsing the
corrected commit dates is visible in case of merge-base commands that do
not reduce the overall number of walked commits.
hyperfine \
-n "old" "$OLD_GIT merge-base v4.8 v4.9" \
-n "new" "$NEW_GIT merge-base v4.8 v4.9" \
--warmup=10
Benchmark 1: old
Time (mean ± σ): 110.4 ms ± 6.4 ms
Range (min … max): 96.0 ms … 118.3 ms 25 runs
Benchmark 2: new
Time (mean ± σ): 150.7 ms ± 1.1 ms
Range (min … max): 149.3 ms … 153.4 ms 19 runs
Summary
'old' ran
1.36 ± 0.08 times faster than 'new'
Performance issues like this are what motivated 702110aac (commit-graph:
use config to specify generation type, 2021-02-25).
In the future, we could fix this performance problem by inserting the
corrected commit date offsets into the Commit Date chunk instead of
having that data in an extra chunk.
Signed-off-by: Derrick Stolee <derrickstolee@github.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
When computing the generation numbers for a commit-graph, we compute
the corrected commit dates and then check if their offsets from the
actual dates is too large to fit in the 32-bit Generation Data chunk.
However, there is a problem with this approach: if we have parsed the
generation data from the previous commit-graph, then we continue the
loop because the corrected commit date is already computed. This causes
an under-count in the number of overflow values.
It is incorrect to add an increment to num_generation_data_overflows
next to this 'continue' statement, because we might start
double-counting commits that are computed because of the depth-first
search walk from a commit with an earlier OID.
Instead, iterate over the full commit list at the end, checking the
offsets to see how many grow beyond the maximum value.
Create a new t5328-commit-graph-64-bit-time.sh test script to handle
special cases of testing 64-bit timestamps. This helps demonstrate this
bug in more cases. It still won't hit all potential cases until the next
change, which reenables reading generation numbers. Use the skip_all
trick from 0a2bfccb9c (t0051: use "skip_all" under !MINGW in
single-test file, 2022-02-04) to make the output clean when run on a
32-bit system.
Helped-by: Ævar Arnfjörð Bjarmason <avarab@gmail.com>
Signed-off-by: Derrick Stolee <derrickstolee@github.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
The graph_git_behavior helper is useful for testing that certain Git
commands behave the same when using the commit-graph and when not using
the commit-graph. Extract it to a new lib-commit-graph.sh file for use
in new test scripts that will split out from t5318.
While doing this extraction, also extract graph_read_expect and the
logic for priming the test_oid_cache.
Signed-off-by: Derrick Stolee <derrickstolee@github.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
It can be helpful to verify that the 'struct commit_graph' that results
from parsing a commit-graph is correctly structured. The existence of
different chunks is not enough to verify that all of the optional
features are correctly enabled.
Update 'test-tool read-graph' to output an "options:" line that includes
information for different parts of the struct commit_graph.
In particular, this change demonstrates that the read_generation_data
option is never being enabled, which will be fixed in a later change.
Signed-off-by: Derrick Stolee <derrickstolee@github.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
Failures within `for` and `while` loops can go unnoticed if not detected
and signaled manually since the loop itself does not abort when a
contained command fails, nor will a failure necessarily be detected when
the loop finishes since the loop returns the exit code of the last
command it ran on the final iteration, which may not be the command
which failed. Therefore, detect and signal failures manually within
loops using the idiom `|| return 1` (or `|| exit 1` within subshells).
Signed-off-by: Eric Sunshine <sunshine@sunshineco.com>
Reviewed-by: Elijah Newren <newren@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
Change fsck to check the "core_commit_graph" variable set in
"repo-settings.c" instead of reading the "core.commitGraph" variable.
This fixes a bug where we wouldn't verify the commit-graph if the
config key was missing. This bug was introduced in
31b1de6a09 (commit-graph: turn on commit-graph by default, 2019-08-13),
where core.commitGraph was turned on by default.
Add tests to "t5318-commit-graph.sh" to verify that fsck checks the
commit-graph as expected for the 3 values of core.commitGraph. Also,
disable GIT_TEST_COMMIT_GRAPH in t/t0410-partial-clone.sh because some
test cases use fsck in ways that assume that commit-graph checking is
disabled.
Helped-by: Ævar Arnfjörð Bjarmason <avarab@gmail.com>
Signed-off-by: Glen Choo <chooglen@google.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
Extend the code added in d6538246d3 (commit-graph: not compatible
with replace objects, 2018-08-20) which ignored replace objects in the
"write" command to ignore it in the "verify" command too.
We can just move this assignment to the cmd_commit_graph(), it
dispatches to "write" and "verify", and we're unlikely to ever get a
sub-command that would like to consider replace refs.
This will make tests added in eddc1f556c (mktag tests: test
update-ref and reachable fsck, 2021-06-17) pass in combination with
the "GIT_TEST_COMMIT_GRAPH" mode added in 859fdc0c3c (commit-graph:
define GIT_TEST_COMMIT_GRAPH, 2018-08-29), except that mode is
currently broken (but is being fixed concurrently). See the discussion
starting at [1].
1. https://lore.kernel.org/git/87wnmihswp.fsf@evledraar.gmail.com/
Signed-off-by: Ævar Arnfjörð Bjarmason <avarab@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
The graph_git_two_modes() helper added in 177722b344 (commit:
integrate commit graph with commit parsing, 2018-04-10) didn't
&&-chain its "git commit-graph" invocations, which as can be seen with
SANITIZE=leak will happily mark tests as passing if both of these
commands die, since test_cmp() will be comparing two empty files.
Signed-off-by: Ævar Arnfjörð Bjarmason <avarab@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
Bring the "commit-graph" command in line with the error output and
general pattern in cmd_multi_pack_index().
Let's test for that output, and also cover the same potential bug as
was fixed in the multi-pack-index command in
88617d11f9 (multi-pack-index: fix potential segfault without
sub-command, 2021-07-19).
Signed-off-by: Ævar Arnfjörð Bjarmason <avarab@gmail.com>
Reviewed-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
Change the parse_options() invocation in the commit-graph code to
error on unknown leftover argv elements, in addition to the existing
and implicit erroring via parse_options() on unknown options.
We'd already error in cmd_commit_graph() on e.g.:
git commit-graph unknown verify
git commit-graph --unknown verify
But here we're calling parse_options() twice more for the "write" and
"verify" subcommands. We did not do the same checking for leftover
argv elements there. As a result we'd silently accept garbage in these
subcommands, let's not do that.
Signed-off-by: Ævar Arnfjörð Bjarmason <avarab@gmail.com>
Reviewed-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
A new configuration variable has been introduced to allow choosing
which version of the generation number gets used in the
commit-graph file.
* ds/commit-graph-generation-config:
commit-graph: use config to specify generation type
commit-graph: create local repository pointer
The common code to deal with "chunked file format" that is shared
by the multi-pack-index and commit-graph files have been factored
out, to help codepaths for both filetypes to become more robust.
* ds/chunked-file-api:
commit-graph.c: display correct number of chunks when writing
chunk-format: add technical docs
chunk-format: restore duplicate chunk checks
midx: use 64-bit multiplication for chunk sizes
midx: use chunk-format read API
commit-graph: use chunk-format read API
chunk-format: create read chunk API
midx: use chunk-format API in write_midx_internal()
midx: drop chunk progress during write
midx: return success/failure in chunk write methods
midx: add num_large_offsets to write_midx_context
midx: add pack_perm to write_midx_context
midx: add entries to write_midx_context
midx: use context in write_midx_pack_names()
midx: rename pack_info to write_midx_context
commit-graph: use chunk-format write API
chunk-format: create chunk format write API
commit-graph: anonymize data in chunk_write_fn
We have two established generation number versions:
1: topological levels
2: corrected commit dates
The corrected commit dates are enabled by default, but they also write
extra data in the GDAT and GDOV chunks. Services that host Git data
might want to have more control over when this feature rolls out than
just updating the Git binaries.
Add a new "commitGraph.generationVersion" config option that specifies
the intended generation number version. If this value is less than 2,
then the GDAT chunk is never written _or read_ from an existing file.
This can replace our use of the GIT_TEST_COMMIT_GRAPH_NO_GDAT
environment variable in the test suite. Remove it.
Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
Test framework clean-up.
* ab/test-lib:
test-lib-functions: assert correct parameter count
test-lib-functions: remove bug-inducing "diagnostics" helper param
test libs: rename "diff-lib" to "lib-diff"
t/.gitattributes: sort lines
test-lib-functions: move function to lib-bitmap.sh
test libs: rename gitweb-lib.sh to lib-gitweb.sh
test libs: rename bundle helper to "lib-bundle.sh"
test-lib-functions: remove generate_zero_bytes() wrapper
test-lib-functions: move test_set_index_version() to its user
test lib: change "error" to "BUG" as appropriate
test-lib: remove check_var_migration
Instead of parsing the table of contents directly, use the chunk-format
API methods read_table_of_contents() and pair_chunk(). While the current
implementation loses the duplicate-chunk detection, that will be added
in a future change.
Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
Since d5cfd142ec (tests: teach the test-tool to generate NUL bytes
and use it, 2019-02-14) the generate_zero_bytes() functions has been a
thin wrapper for "test-tool genzeros". Let's have its only user call
that directly instead.
Signed-off-by: Ævar Arnfjörð Bjarmason <avarab@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
Before checking if the repository has a commit-graph loaded, be sure
to run prepare_commit_graph(). This is necessary because otherwise
the topo_levels slab is not initialized. As we compute topo_levels for
the new commits, we iterate further into the lower layers since the
first visit to each commit looks as though the topo_level is not
populated.
By properly initializing the topo_slab, we fix the previously broken
case of a split commit graph where a base layer has the
generation_data_overflow chunk.
Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Reviewed-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
There is a subtle failure happening when computing corrected commit
dates with --split enabled. It requires a base layer needing the
generation_data_overflow chunk. Then, the next layer on top
erroneously thinks it needs an overflow chunk due to a bug leading
to recalculating all reachable generation numbers. The output of
the failure is
BUG: commit-graph.c:1912: expected to write 8 bytes to
chunk 47444f56, but wrote 0 instead
These "expected" 8 bytes are due to re-computing the corrected
commit date for the lower layer but the new layer does not need
any overflow.
Add a test to t5318-commit-graph.sh that demonstrates this bug. However,
it does not trigger consistently with the existing code.
The generation number data is stored in a slab and accessed by
commit_graph_data_at(). This data is initialized when parsing a commit,
but is otherwise used assuming it has been populated. The loop in
compute_generation_numbers() did not enforce that all reachable
commits were parsed and had correct values. This could lead to some
problems when writing a commit-graph with corrected commit dates based
on a commit-graph without them.
It has been difficult to identify the issue here because it was so hard
to reproduce. It relies on this uninitialized data having a non-zero
value, but also on specifically in a way that overwrites the existing
data.
This patch adds the extra parse to ensure the data is filled before we
compute the generation number of a commit. This triggers the new test
to fail because the generation number overflow count does not match
between this computation and the write for that chunk.
The actual fix will follow as the next few changes.
Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Reviewed-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
As discovered by Ævar, we cannot increment graph version to
distinguish between generation numbers v1 and v2 [1]. Thus, one of
pre-requistes before implementing generation number v2 was to
distinguish between graph versions in a backwards compatible manner.
We are going to introduce a new chunk called Generation DATa chunk (or
GDAT). GDAT will store corrected committer date offsets whereas CDAT
will still store topological level.
Old Git does not understand GDAT chunk and would ignore it, reading
topological levels from CDAT. New Git can parse GDAT and take advantage
of newer generation numbers, falling back to topological levels when
GDAT chunk is missing (as it would happen with a commit-graph written
by old Git).
We introduce a test environment variable 'GIT_TEST_COMMIT_GRAPH_NO_GDAT'
which forces commit-graph file to be written without generation data
chunk to emulate a commit-graph file written by old Git.
To minimize the space required to store corrrected commit date, Git
stores corrected commit date offsets into the commit-graph file, instea
of corrected commit dates. This saves us 4 bytes per commit, decreasing
the GDAT chunk size by half, but it's possible for the offset to
overflow the 4-bytes allocated for storage. As such overflows are and
should be exceedingly rare, we use the following overflow management
scheme:
We introduce a new commit-graph chunk, Generation Data OVerflow ('GDOV')
to store corrected commit dates for commits with offsets greater than
GENERATION_NUMBER_V2_OFFSET_MAX.
If the offset is greater than GENERATION_NUMBER_V2_OFFSET_MAX, we set
the MSB of the offset and the other bits store the position of corrected
commit date in GDOV chunk, similar to how Extra Edge List is maintained.
We test the overflow-related code with the following repo history:
F - N - U
/ \
U - N - U N
\ /
N - F - N
Where the commits denoted by U have committer date of zero seconds
since Unix epoch, the commits denoted by N have committer date of
1112354055 (default committer date for the test suite) seconds since
Unix epoch and the commits denoted by F have committer date of
(2 ^ 31 - 2) seconds since Unix epoch.
The largest offset observed is 2 ^ 31, just large enough to overflow.
[1]: https://lore.kernel.org/git/87a7gdspo4.fsf@evledraar.gmail.com/
Signed-off-by: Abhishek Kumar <abhishekkumar8222@gmail.com>
Reviewed-by: Taylor Blau <me@ttaylorr.com>
Reviewed-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
The commit-graph format reserved a byte among the header of the file to
store a "hash version". During the SHA-256 work, this was not modified
because file formats are not necessarily intended to work across hash
versions. If a repository has SHA-256 as its hash algorithm, it
automatically up-shifts the lengths of object names in all necessary
formats.
However, since we have this byte available for adjusting the version, we
can make the file formats more obviously incompatible instead of relying
on other context from the repository.
Update the oid_version() method in commit-graph.c to add a new value, 2,
for sha-256. This automatically writes the new value in a SHA-256
repository _and_ verifies the value is correct. This is a breaking
change relative to the current 'master' branch since 092b677 (Merge
branch 'bc/sha-256-cvs-svn-updates', 2020-08-13) but it is not breaking
relative to any released version of Git.
The test impact is relatively minor: the output of 'test-tool
read-graph' lists the header information, so those instances of '1' need
to be replaced with a variable determined by GIT_TEST_DEFAULT_HASH. A
more careful test is added that specifically creates a repository of
each type then swaps the commit-graph files. The important value here is
that the "git log" command succeeds while writing a message to stderr.
Helped-by: brian m. carlson <sandals@crustytoothpaste.net>
Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Reviewed-by: brian m. carlson <sandals@crustytoothpaste.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
The final leg of SHA-256 transition.
* bc/sha-256-part-3: (39 commits)
t: remove test_oid_init in tests
docs: add documentation for extensions.objectFormat
ci: run tests with SHA-256
t: make SHA1 prerequisite depend on default hash
t: allow testing different hash algorithms via environment
t: add test_oid option to select hash algorithm
repository: enable SHA-256 support by default
setup: add support for reading extensions.objectformat
bundle: add new version for use with SHA-256
builtin/verify-pack: implement an --object-format option
http-fetch: set up git directory before parsing pack hashes
t0410: mark test with SHA1 prerequisite
t5308: make test work with SHA-256
t9700: make hash size independent
t9500: ensure that algorithm info is preserved in config
t9350: make hash size independent
t9301: make hash size independent
t9300: use $ZERO_OID instead of hard-coded object ID
t9300: abstract away SHA-1-specific constants
t8011: make hash size independent
...
Updates to the changed-paths bloom filter.
* ds/commit-graph-bloom-updates:
commit-graph: check all leading directories in changed path Bloom filters
revision: empty pathspecs should not use Bloom filters
revision.c: fix whitespace
commit-graph: check chunk sizes after writing
commit-graph: simplify chunk writes into loop
commit-graph: unify the signatures of all write_graph_chunk_*() functions
commit-graph: persist existence of changed-paths
bloom: fix logic in get_bloom_filter()
commit-graph: change test to die on parse, not load
commit-graph: place bloom_settings in context
The changed-path Bloom filter is improved using ideas from an
independent implementation.
* sg/commit-graph-cleanups:
commit-graph: simplify write_commit_graph_file() #2
commit-graph: simplify write_commit_graph_file() #1
commit-graph: simplify parse_commit_graph() #2
commit-graph: simplify parse_commit_graph() #1
commit-graph: clean up #includes
diff.h: drop diff_tree_oid() & friends' return value
commit-slab: add a function to deep free entries on the slab
commit-graph-format.txt: all multi-byte numbers are in network byte order
commit-graph: fix parsing the Chunk Lookup table
tree-walk.c: don't match submodule entries for 'submod/anything'
Now that we call test_oid_init in the setup for all test scripts,
there's no point in calling it individually. Remove all of the places
where we've done so to help keep tests tidy.
Signed-off-by: brian m. carlson <sandals@crustytoothpaste.net>
Reviewed-by: Eric Sunshine <sunshine@sunshineco.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
43d3561 (commit-graph write: don't die if the existing graph is corrupt,
2019-03-25) introduced the GIT_TEST_COMMIT_GRAPH_DIE_ON_LOAD environment
variable. This was created to verify that commit-graph was not loaded
when writing a new non-incremental commit-graph.
An upcoming change wants to load a commit-graph in some valuable cases,
but we want to maintain that we don't trust the commit-graph data when
writing our new file. Instead of dying on load, instead die if we ever
try to parse a commit from the commit-graph. This functionally verifies
the same intended behavior, but allows a more advanced feature in the
next change.
Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
While we iterate over all entries of the Chunk Lookup table we make
sure that we don't attempt to read past the end of the mmap-ed
commit-graph file, and check in each iteration that the chunk ID and
offset we are about to read is still within the mmap-ed memory region.
However, these checks in each iteration are not really necessary,
because the number of chunks in the commit-graph file is already known
before this loop from the just parsed commit-graph header.
So let's check that the commit-graph file is large enough for all
entries in the Chunk Lookup table before we start iterating over those
entries, and drop those per-iteration checks. While at it, take into
account the size of everything that is necessary to have a valid
commit-graph file, i.e. the size of the header, the size of the
mandatory OID Fanout chunk, and the size of the signature in the
trailer as well.
Note that this necessitates the change of the error message as well,
and, consequently, have to update the 'detect incorrect chunk count'
test in 't5318-commit-graph.sh' as well.
Signed-off-by: SZEDER Gábor <szeder.dev@gmail.com>
Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
The commit-graph file format specifies that the chunks may be in any
order. However, if the OID Lookup chunk happens to be the last one in
the file, then any command attempting to access the commit-graph data
will fail with:
fatal: invalid commit position. commit-graph is likely corrupt
In this case the error is wrong, the commit-graph file does conform to
the specification, but the parsing of the Chunk Lookup table is a bit
buggy, and leaves the field holding the number of commits in the
commit-graph zero-initialized.
The number of commits in the commit-graph is determined while parsing
the Chunk Lookup table, by dividing the size of the OID Lookup chunk
with the hash size. However, the Chunk Lookup table doesn't actually
store the size of the chunks, but it stores their starting offset.
Consequently, the size of a chunk can only be calculated by
subtracting the starting offsets of that chunk from the offset of the
subsequent chunk, or in case of the last chunk from the offset
recorded in the terminating label. This is currenly implemented in a
bit complicated way: as we iterate over the entries of the Chunk
Lookup table, we check the ID of each chunk and store its starting
offset, then we check the ID of the last seen chunk and calculate its
size using its previously saved offset if necessary (at the moment
it's only necessary for the OID Lookup chunk). Alas, while parsing
the Chunk Lookup table we only interate through the "real" chunks, but
never look at the terminating label, thus don't even check whether
it's necessary to calulate the size of the last chunk. Consequently,
if the OID Lookup chunk is the last one, then we don't calculate its
size and turn don't run the piece of code determining the number of
commits in the commit graph, leaving the field holding that number
unchanged (i.e. zero-initialized), eventually triggering the sanity
check in load_oid_from_graph().
Fix this by iterating through all entries in the Chunk Lookup table,
including the terminating label.
Note that this is the minimal fix, suitable for the maintenance track.
A better fix would be to simplify how the chunk sizes are calculated,
but that is a more invasive change, less suitable for 'maint', so that
will be done in later patches.
This additional flexibility of scanning more chunks breaks a test for
"git commit-graph verify" so alter that test to mutate the commit-graph
to have an even lower chunk count.
Signed-off-by: SZEDER Gábor <szeder.dev@gmail.com>
Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
The following lines were not covered in a recent line-coverage test
against Git:
builtin/commit-graph.c
5b6653e5 244) progress = start_delayed_progress(
5b6653e5 268) stop_progress(&progress);
These statements are executed when both '--stdin-commits' and
'--progress' are passed. Introduce a trio of tests that exercise various
combinations of these options to ensure that these lines are covered.
More importantly, this is exercising a (somewhat) previously-ignored
feature of '--stdin-commits', which is that it respects '--progress'.
Prior to 5b6653e523 (builtin/commit-graph.c: dereference tags in
builtin, 2020-05-13), dereferencing input from '--stdin-commits' was
done inside of commit-graph.c.
Now that an additional progress meter may be generated from outside of
commit-graph.c, add a corresponding test to make sure that it also
respects '--[no]-progress'.
The other location that generates progress meter output (from d335ce8f24
(commit-graph.c: show progress of finding reachable commits,
2020-05-13)) is already covered by any test that passes '--reachable'.
Signed-off-by: Taylor Blau <me@ttaylorr.com>
Acked-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
A handful of tests in t5318 use 'test_line_count = 0 ...' to make sure
that some command does not write any output. While correct, it is more
idiomatic to use 'test_must_be_empty' instead. Switch the former
invocations to use the latter instead.
Signed-off-by: Taylor Blau <me@ttaylorr.com>
Acked-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
Since 7c5c9b9c57 (commit-graph: error out on invalid commit oids in
'write --stdin-commits', 2019-08-05), the commit-graph builtin dies on
receiving non-commit OIDs as input to '--stdin-commits'.
This behavior can be cumbersome to work around in, say, the case of
piping 'git for-each-ref' to 'git commit-graph write --stdin-commits' if
the caller does not want to cull out non-commits themselves. In this
situation, it would be ideal if 'git commit-graph write' wrote the graph
containing the inputs that did pertain to commits, and silently ignored
the remainder of the input.
Some options have been proposed to the effect of '--[no-]check-oids'
which would allow callers to have the commit-graph builtin do just that.
After some discussion, it is difficult to imagine a caller who wouldn't
want to pass '--no-check-oids', suggesting that we should get rid of the
behavior of complaining about non-commit inputs altogether.
If callers do wish to retain this behavior, they can easily work around
this change by doing the following:
git for-each-ref --format='%(objectname) %(objecttype) %(*objecttype)' |
awk '
!/commit/ { print "not-a-commit:"$1 }
/commit/ { print $1 }
' |
git commit-graph write --stdin-commits
To make it so that valid OIDs that refer to non-existent objects are
indeed an error after loosening the error handling, perform an extra
lookup to make sure that object indeed exists before sending it to the
commit-graph internals.
Helped-by: Jeff King <peff@peff.net>
Signed-off-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
In the subsequent commit, we will introduce a dependency on
'graph_read_expect' from t5318.7. Preemptively move it below
'graph_read_expect()'s definition so that the test can call it.
Signed-off-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
Some of the files commit-graph subsystem keeps on disk did not
correctly honor the core.sharedRepository settings and some were
left read-write.
* tb/commit-graph-perm-bits:
commit-graph.c: make 'commit-graph-chain's read-only
commit-graph.c: ensure graph layers respect core.sharedRepository
commit-graph.c: write non-split graphs as read-only
lockfile.c: introduce 'hold_lock_file_for_update_mode'
tempfile.c: introduce 'create_tempfile_mode'
Introduce an extension to the commit-graph to make it efficient to
check for the paths that were modified at each commit using Bloom
filters.
* gs/commit-graph-path-filter:
bloom: ignore renames when computing changed paths
commit-graph: add GIT_TEST_COMMIT_GRAPH_CHANGED_PATHS test flag
t4216: add end to end tests for git log with Bloom filters
revision.c: add trace2 stats around Bloom filter usage
revision.c: use Bloom filters to speed up path based revision walks
commit-graph: add --changed-paths option to write subcommand
commit-graph: reuse existing Bloom filters during write
commit-graph: write Bloom filters to commit graph file
commit-graph: examine commits by generation number
commit-graph: examine changed-path objects in pack order
commit-graph: compute Bloom filters for changed paths
diff: halt tree-diff early after max_changes
bloom.c: core Bloom filter implementation for changed paths.
bloom.c: introduce core Bloom filter constructs
bloom.c: add the murmur3 hash implementation
commit-graph: define and use MAX_NUM_CHUNKS
In the previous commit, Git learned 'hold_lock_file_for_update_mode' to
allow the caller to specify the permission bits (prior to further
adjustment by the umask and shared repository permissions) used when
acquiring a temporary file.
Use this in the commit-graph machinery for writing a non-split graph to
acquire an opened temporary file with permissions read-only permissions
to match the split behavior. (In the split case, Git uses
git_mkstemp_mode' for each of the commit-graph layers with permission
bits '0444').
One can notice this discrepancy when moving a non-split graph to be part
of a new chain. This causes a commit-graph chain where all layers have
read-only permission bits, except for the base layer, which is writable
for the current user.
Resolve this discrepancy by using the new
'hold_lock_file_for_update_mode' and passing the desired permission
bits.
Doing so causes some test fallout in t5318 and t6600. In t5318, this
occurs in tests that corrupt a commit-graph file by writing into it. For
these, 'chmod u+w'-ing the file beforehand resolves the issue. The
additional spot in 'corrupt_graph_verify' is necessary because of the
extra 'git commit-graph write' beforehand (which *does* rewrite the
commit-graph file). In t6600, this is caused by copying a read-only
commit-graph file into place and then trying to replace it. For these,
make these files writable.
Helped-by: Junio C Hamano <gitster@pobox.com>
Signed-off-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
When operating on a stream of commit OIDs on stdin, 'git commit-graph
write' checks that each OID refers to an object that is indeed a commit.
This is convenient to make sure that the given input is well-formed, but
can sometimes be undesirable.
For example, server operators may wish to feed the refnames that were
updated during a push to 'git commit-graph write --input=stdin-commits',
and silently discard refs that don't point at commits. This can be done
by combing the output of 'git for-each-ref' with '--format
%(*objecttype)', but this requires opening up a potentially large number
of objects. Instead, it is more convenient to feed the updated refs to
the commit-graph machinery, and let it throw out refs that don't point
to commits.
Introduce '--[no-]check-oids' to make such a behavior possible. With
'--check-oids' (the default behavior to retain backwards compatibility),
'git commit-graph write' will barf on a non-commit line in its input.
With 'no-check-oids', such lines will be silently ignored, making the
above possible by specifying this option.
No matter which is supplied, 'git commit-graph write' retains the
behavior from the previous commit of rejecting non-OID inputs like
"HEAD" and "refs/heads/foo" as before.
Signed-off-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
The 'write_commit_graph()' function takes in either a string list of
pack indices, or a string list of hexadecimal commit OIDs. These
correspond to the '--stdin-packs' and '--stdin-commits' mode(s) from
'git commit-graph write'.
Using a string_list of hexadecimal commit IDs is not the most efficient
use of memory, since we can instead use the 'struct oidset', which is
more well-suited for this case.
This has another benefit which will become apparent in the following
commit. This is that we are about to disambiguate the kinds of errors we
produce with '--stdin-commits' into "non-hex input" and "hex-input, but
referring to a non-commit object". By having 'write_commit_graph' take
in a 'struct oidset *' of commits, we place the burden on the caller (in
this case, the builtin) to handle the first case, and the commit-graph
machinery can handle the second case.
Suggested-by: Jeff King <peff@peff.net>
Signed-off-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
Add GIT_TEST_COMMIT_GRAPH_CHANGED_PATHS test flag to the test setup suite
in order to toggle writing Bloom filters when running any of the git tests.
If set to true, we will compute and write Bloom filters every time a test
calls `git commit-graph write`, as if the `--changed-paths` option was
passed in.
The test suite passes when GIT_TEST_COMMIT_GRAPH and
GIT_TEST_COMMIT_GRAPH_CHANGED_PATHS are enabled.
Helped-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Garima Singh <garima.singh@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
