Commit graph

139 commits

Author SHA1 Message Date
Junio C Hamano 66685e8555 Merge branch 'ps/commit-graph-less-paranoid'
Earlier we stopped relying on commit-graph that (still) records
information about commits that are lost from the object store,
which has negative performance implications.  The default has been
flipped to disable this pessimization.

* ps/commit-graph-less-paranoid:
  commit-graph: disable GIT_COMMIT_GRAPH_PARANOIA by default
2023-12-18 14:10:11 -08:00
Junio C Hamano 34401b7ddb Merge branch 'jk/chunk-bounds-more'
Code clean-up for jk/chunk-bounds topic.

* jk/chunk-bounds-more:
  commit-graph: mark chunk error messages for translation
  commit-graph: drop verify_commit_graph_lite()
  commit-graph: check order while reading fanout chunk
  commit-graph: use fanout value for graph size
  commit-graph: abort as soon as we see a bogus chunk
  commit-graph: clarify missing-chunk error messages
  commit-graph: drop redundant call to "lite" verification
  midx: check consistency of fanout table
  commit-graph: handle overflow in chunk_size checks
2023-12-09 16:37:48 -08:00
Patrick Steinhardt b1df3b3867 commit-graph: disable GIT_COMMIT_GRAPH_PARANOIA by default
In 7a5d604443 (commit: detect commits that exist in commit-graph but not
in the ODB, 2023-10-31), we have introduced a new object existence check
into `repo_parse_commit_internal()` so that we do not parse commits via
the commit-graph that don't have a corresponding object in the object
database. This new check of course comes with a performance penalty,
which the commit put at around 30% for `git rev-list --topo-order`. But
there are in fact scenarios where the performance regression is even
higher. The following benchmark against linux.git with a fully-build
commit-graph:

  Benchmark 1: git.v2.42.1 rev-list --count HEAD
    Time (mean ± σ):     658.0 ms ±   5.2 ms    [User: 613.5 ms, System: 44.4 ms]
    Range (min … max):   650.2 ms … 666.0 ms    10 runs

  Benchmark 2: git.v2.43.0-rc1 rev-list --count HEAD
    Time (mean ± σ):      1.333 s ±  0.019 s    [User: 1.263 s, System: 0.069 s]
    Range (min … max):    1.302 s …  1.361 s    10 runs

  Summary
    git.v2.42.1 rev-list --count HEAD ran
      2.03 ± 0.03 times faster than git.v2.43.0-rc1 rev-list --count HEAD

While it's a noble goal to ensure that results are the same regardless
of whether or not we have a potentially stale commit-graph, taking twice
as much time is a tough sell. Furthermore, we can generally assume that
the commit-graph will be updated by git-gc(1) or git-maintenance(1) as
required so that the case where the commit-graph is stale should not at
all be common.

With that in mind, default-disable GIT_COMMIT_GRAPH_PARANOIA and restore
the behaviour and thus performance previous to the mentioned commit. In
order to not be inconsistent, also disable this behaviour by default in
`lookup_commit_in_graph()`, where the object existence check has been
introduced right at its inception via f559d6d45e (revision: avoid
hitting packfiles when commits are in commit-graph, 2021-08-09).

This results in another speedup in commands that end up calling this
function, even though it's less pronounced compared to the above
benchmark. The following has been executed in linux.git with ~1.2
million references:

  Benchmark 1: GIT_COMMIT_GRAPH_PARANOIA=true git rev-list --all --no-walk=unsorted
    Time (mean ± σ):      2.947 s ±  0.003 s    [User: 2.412 s, System: 0.534 s]
    Range (min … max):    2.943 s …  2.949 s    3 runs

  Benchmark 2: GIT_COMMIT_GRAPH_PARANOIA=false git rev-list --all --no-walk=unsorted
    Time (mean ± σ):      2.724 s ±  0.030 s    [User: 2.207 s, System: 0.514 s]
    Range (min … max):    2.704 s …  2.759 s    3 runs

  Summary
    GIT_COMMIT_GRAPH_PARANOIA=false git rev-list --all --no-walk=unsorted ran
      1.08 ± 0.01 times faster than GIT_COMMIT_GRAPH_PARANOIA=true git rev-list --all --no-walk=unsorted

So whereas 7a5d604443 initially introduced the logic to start doing an
object existence check in `repo_parse_commit_internal()` by default, the
updated logic will now instead cause `lookup_commit_in_graph()` to stop
doing the check by default. This behaviour continues to be tweakable by
the user via the GIT_COMMIT_GRAPH_PARANOIA environment variable.

Note that this requires us to amend some tests to manually turn on the
paranoid checks again. This is because we cause repository corruption by
manually deleting objects which are part of the commit graph already.
These circumstances shouldn't usually happen in repositories.

Reported-by: Jeff King <peff@peff.net>
Signed-off-by: Patrick Steinhardt <ps@pks.im>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2023-11-26 10:10:00 +09:00
Jeff King 06fb135f8e commit-graph: check order while reading fanout chunk
We read the fanout chunk, storing a pointer to it, but only confirm that
the entries are monotonic in a final "lite" verification step. Let's
move that into the actual OIDF chunk callback, so that we can report
problems immediately (for all the reasons given in the previous
"commit-graph: abort as soon as we see a bogus chunk" commit).

Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2023-11-09 19:07:53 +09:00
Jeff King d3b6f6c631 commit-graph: use fanout value for graph size
Commit-graph, midx, and pack idx files all have both a lookup table of
oids and an oid fanout table. In midx and pack idx files, we take the
final entry of the fanout table as the source of truth for the number of
entries, and then verify that the size of the lookup table matches that.
But for commit-graph files, we do the opposite: we use the size of the
lookup table as the source of truth, and then check the final fanout
entry against it.

As noted in 4169d89645 (commit-graph: check consistency of fanout
table, 2023-10-09), either is correct. But there are a few reasons to
prefer the fanout table as the source of truth:

  1. The fanout entries are 32-bits on disk, and that defines the
     maximum number of entries we can store. But since the size of the
     lookup table is only bounded by the filesystem, it can be much
     larger. And hence computing it as the commit-graph does means that
     we may truncate the result when storing it in a uint32_t.

  2. We read the fanout first, then the lookup table. If we're verifying
     the chunks as we read them, then we'd want to take the fanout as
     truth (we have nothing yet to check it against) and then we can
     check that the lookup table matches what we already know.

  3. It is pointlessly inconsistent with the midx and pack idx code.
     Since the three have to do similar size and bounds checks, it is
     easier to reason about all three if they use the same approach.

So this patch moves the assignment of g->num_commits to the fanout
parser, and then we can check the size of the lookup chunk as soon as we
try to load it.

There's already a test covering this situation, which munges the final
fanout entry to 2^32-1. In the current code we complain that it does not
agree with the table size. But now that we treat the munged value as the
source of truth, we'll complain that the lookup table is the wrong size
(again, either is correct). So we'll have to update the message we
expect (and likewise for an earlier test which does similar munging).

There's a similar test for this situation on the midx side, but rather
than making a very-large fanout value, it just truncates the lookup
table. We could do that here, too, but the very-large fanout value
actually shows an interesting corner case. On a 32-bit system,
multiplying to find the expected table size would cause an integer
overflow. Using st_mult() would detect that, but cause us to die()
rather than falling back to the non-graph code path. Checking the size
using division (as we do with existing chunk-size checks) avoids the
overflow entirely, and the test demonstrates this when run on a 32-bit
system.

Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2023-11-09 19:07:53 +09:00
Jeff King 93d2924729 commit-graph: clarify missing-chunk error messages
When a required commit-graph chunk cannot be loaded, we leave its entry
in the struct NULL, and then later complain that it is missing. But
that's just one reason we might not have loaded it, as we also do some
data quality checks.

Let's switch these messages to say "missing or corrupted", which is
exactly what the midx code says for the same cases. Likewise, we'll use
the same phrasing and capitalization as those for consistency. And while
we're here, we can mark them for translation (just like the midx ones).

Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2023-11-09 19:07:53 +09:00
Junio C Hamano a8e2394704 Merge branch 'jc/test-i18ngrep'
Another step to deprecate test_i18ngrep.

* jc/test-i18ngrep:
  tests: teach callers of test_i18ngrep to use test_grep
  test framework: further deprecate test_i18ngrep
2023-11-08 11:04:02 +09:00
Junio C Hamano 42b87f7ee6 Merge branch 'ps/do-not-trust-commit-graph-blindly-for-existence'
The codepath to traverse the commit-graph learned to notice that a
commit is missing (e.g., corrupt repository lost an object), even
though it knows something about the commit (like its parents) from
what is in commit-graph.

* ps/do-not-trust-commit-graph-blindly-for-existence:
  commit: detect commits that exist in commit-graph but not in the ODB
  commit-graph: introduce envvar to disable commit existence checks
2023-11-08 11:03:59 +09:00
Junio C Hamano 6789275d37 tests: teach callers of test_i18ngrep to use test_grep
They are equivalents and the former still exists, so as long as the
only change this commit makes are to rewrite test_i18ngrep to
test_grep, there won't be any new bug, even if there still are
callers of test_i18ngrep remaining in the tree, or when merged to
other topics that add new uses of test_i18ngrep.

This patch was produced more or less with

    git grep -l -e 'test_i18ngrep ' 't/t[0-9][0-9][0-9][0-9]-*.sh' |
    xargs perl -p -i -e 's/test_i18ngrep /test_grep /'

and a good way to sanity check the result yourself is to run the
above in a checkout of c4603c1c (test framework: further deprecate
test_i18ngrep, 2023-10-31) and compare the resulting working tree
contents with the result of applying this patch to the same commit.
You'll see that test_i18ngrep in a few t/lib-*.sh files corrected,
in addition to the manual reproduction.

Signed-off-by: Junio C Hamano <gitster@pobox.com>
2023-11-02 17:13:44 +09:00
Patrick Steinhardt 7a5d604443 commit: detect commits that exist in commit-graph but not in the ODB
Commit graphs can become stale and contain references to commits that do
not exist in the object database anymore. Theoretically, this can lead
to a scenario where we are able to successfully look up any such commit
via the commit graph even though such a lookup would fail if done via
the object database directly.

As the commit graph is mostly intended as a sort of cache to speed up
parsing of commits we do not want to have diverging behaviour in a
repository with and a repository without commit graphs, no matter
whether they are stale or not. As commits are otherwise immutable, the
only thing that we really need to care about is thus the presence or
absence of a commit.

To address potentially stale commit data that may exist in the graph,
our `lookup_commit_in_graph()` function will check for the commit's
existence in both the commit graph, but also in the object database. So
even if we were able to look up the commit's data in the graph, we would
still pretend as if the commit didn't exist if it is missing in the
object database.

We don't have the same safety net in `parse_commit_in_graph_one()`
though. This function is mostly used internally in "commit-graph.c"
itself to validate the commit graph, and this usage is fine. We do
expose its functionality via `parse_commit_in_graph()` though, which
gets called by `repo_parse_commit_internal()`, and that function is in
turn used in many places in our codebase.

For all I can see this function is never used to directly turn an object
ID into a commit object without additional safety checks before or after
this lookup. What it is being used for though is to walk history via the
parent chain of commits. So when commits in the parent chain of a graph
walk are missing it is possible that we wouldn't notice if that missing
commit was part of the commit graph. Thus, a query like `git rev-parse
HEAD~2` can succeed even if the intermittent commit is missing.

It's unclear whether there are additional ways in which such stale
commit graphs can lead to problems. In any case, it feels like this is a
bigger bug waiting to happen when we gain additional direct or indirect
callers of `repo_parse_commit_internal()`. So let's fix the inconsistent
behaviour by checking for object existence via the object database, as
well.

This check of course comes with a performance penalty. The following
benchmarks have been executed in a clone of linux.git with stable tags
added:

    Benchmark 1: git -c core.commitGraph=true rev-list --topo-order --all (git = master)
      Time (mean ± σ):      2.913 s ±  0.018 s    [User: 2.363 s, System: 0.548 s]
      Range (min … max):    2.894 s …  2.950 s    10 runs

    Benchmark 2: git -c core.commitGraph=true rev-list --topo-order --all (git = pks-commit-graph-inconsistency)
      Time (mean ± σ):      3.834 s ±  0.052 s    [User: 3.276 s, System: 0.556 s]
      Range (min … max):    3.780 s …  3.961 s    10 runs

    Benchmark 3: git -c core.commitGraph=false rev-list --topo-order --all (git = master)
      Time (mean ± σ):     13.841 s ±  0.084 s    [User: 13.152 s, System: 0.687 s]
      Range (min … max):   13.714 s … 13.995 s    10 runs

    Benchmark 4: git -c core.commitGraph=false rev-list --topo-order --all (git = pks-commit-graph-inconsistency)
      Time (mean ± σ):     13.762 s ±  0.116 s    [User: 13.094 s, System: 0.667 s]
      Range (min … max):   13.645 s … 14.038 s    10 runs

    Summary
      git -c core.commitGraph=true rev-list --topo-order --all (git = master) ran
        1.32 ± 0.02 times faster than git -c core.commitGraph=true rev-list --topo-order --all (git = pks-commit-graph-inconsistency)
        4.72 ± 0.05 times faster than git -c core.commitGraph=false rev-list --topo-order --all (git = pks-commit-graph-inconsistency)
        4.75 ± 0.04 times faster than git -c core.commitGraph=false rev-list --topo-order --all (git = master)

We look at a ~30% regression in general, but in general we're still a
whole lot faster than without the commit graph. To counteract this, the
new check can be turned off with the `GIT_COMMIT_GRAPH_PARANOIA` envvar.

Signed-off-by: Patrick Steinhardt <ps@pks.im>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2023-11-01 12:04:06 +09:00
Patrick Steinhardt e04838ea82 commit-graph: introduce envvar to disable commit existence checks
Our `lookup_commit_in_graph()` helper tries to look up commits from the
commit graph and, if it doesn't exist there, falls back to parsing it
from the object database instead. This is intended to speed up the
lookup of any such commit that exists in the database. There is an edge
case though where the commit exists in the graph, but not in the object
database. To avoid returning such stale commits the helper function thus
double checks that any such commit parsed from the graph also exists in
the object database. This makes the function safe to use even when
commit graphs aren't updated regularly.

We're about to introduce the same pattern into other parts of our code
base though, namely `repo_parse_commit_internal()`. Here the extra
sanity check is a bit of a tougher sell: `lookup_commit_in_graph()` was
a newly introduced helper, and as such there was no performance hit by
adding this sanity check. If we added `repo_parse_commit_internal()`
with that sanity check right from the beginning as well, this would
probably never have been an issue to begin with. But by retrofitting it
with this sanity check now we do add a performance regression to
preexisting code, and thus there is a desire to avoid this or at least
give an escape hatch.

In practice, there is no inherent reason why either of those functions
should have the sanity check whereas the other one does not: either both
of them are able to detect this issue or none of them should be. This
also means that the default of whether we do the check should likely be
the same for both. To err on the side of caution, we thus rather want to
make `repo_parse_commit_internal()` stricter than to loosen the checks
that we already have in `lookup_commit_in_graph()`.

The escape hatch is added in the form of a new GIT_COMMIT_GRAPH_PARANOIA
environment variable that mirrors GIT_REF_PARANOIA. If enabled, which is
the default, we will double check that commits looked up in the commit
graph via `lookup_commit_in_graph()` also exist in the object database.
This same check will also be added in `repo_parse_commit_internal()`.

Signed-off-by: Patrick Steinhardt <ps@pks.im>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2023-11-01 12:04:06 +09:00
Jeff King 4a3c34662b commit-graph: check size of generations chunk
We neither check nor record the size of the generations chunk we parse
from a commit-graph file. This should have one uint32_t for each commit
in the file; if it is smaller (due to corruption, etc), we may read
outside the mapped memory.

The included test segfaults without this patch, as it shrinks the size
considerably (and the chunk is near the end of the file, so we read off
the end of the array rather than accidentally reading another chunk).

We can fix this by checking the size up front (like we do for other
fixed-size chunks, like CDAT).

Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2023-10-09 15:55:01 -07:00
Jeff King 9622610e55 commit-graph: detect out-of-bounds extra-edges pointers
If an entry in a commit-graph file has more than 2 parents, the
fixed-size parent fields instead point to an offset within an "extra
edges" chunk. We blindly follow these, assuming that the chunk is
present and sufficiently large; this can lead to an out-of-bounds read
for a corrupt or malicious file.

We can fix this by recording the size of the chunk and adding a
bounds-check in fill_commit_in_graph(). There are a few tricky bits:

  1. We'll switch from working with a pointer to an offset. This makes
     some corner cases just fall out naturally:

      a. If we did not find an EDGE chunk at all, our size will
         correctly be zero (so everything is "out of bounds").

      b. Comparing "size / 4" lets us make sure we have at least 4 bytes
         to read, and we never compute a pointer more than one element
         past the end of the array (computing a larger pointer is
         probably OK in practice, but is technically undefined
         behavior).

      c. The current code casts to "uint32_t *". Replacing it with an
         offset avoids any comparison between different types of pointer
         (since the chunk is stored as "unsigned char *").

  2. This is the first case in which fill_commit_in_graph() may return
     anything but success. We need to make sure to roll back the
     "parsed" flag (and any parents we might have added before running
     out of buffer) so that the caller can cleanly fall back to
     loading the commit object itself.

     It's a little non-trivial to do this, and we might benefit from
     factoring it out. But we can wait on that until we actually see a
     second case where we return an error.

As a bonus, this lets us drop the st_mult() call. Since we've already
done a bounds check, we know there won't be any integer overflow (it
would imply our buffer is larger than a size_t can hold).

The included test does not actually segfault before this patch (though
you could construct a case where it does). Instead, it reads garbage
from the next chunk which results in it complaining about a bogus parent
id. This is sufficient for our needs, though (we care that the fallback
succeeds, and that stderr mentions the out-of-bounds read).

Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2023-10-09 15:55:01 -07:00
Jeff King b72df612af commit-graph: check size of commit data chunk
We expect a commit-graph file to have a fixed-size data record for each
commit in the file (and we know the number of commits to expct from the
size of the lookup table). If we encounter a file where this is too
small, we'll look past the end of the chunk (and possibly even off the
mapped memory).

We can fix this by checking the size up front when we record the
pointer.

The included test doesn't segfault, since it ends up reading bytes
from another chunk. But it produces nonsense results, since the values
it reads are garbage. Our test notices this by comparing the output to a
non-corrupted run of the same command (and of course we also check that
the expected error is printed to stderr).

Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2023-10-09 15:55:01 -07:00
Jeff King 4169d89645 commit-graph: check consistency of fanout table
We use bsearch_hash() to look up items in the oid index of a
commit-graph. It also has a fanout table to reduce the initial range in
which we'll search. But since the fanout comes from the on-disk file, a
corrupted or malicious file can cause us to look outside of the
allocated index memory.

One solution here would be to pass the total table size to
bsearch_hash(), which could then bounds check the values it reads from
the fanout. But there's an inexpensive up-front check we can do, and
it's the same one used by the midx and pack idx code (both of which
likewise have fanout tables and use bsearch_hash(), but are not affected
by this bug):

  1. We can check the value of the final fanout entry against the size
     of the table we got from the index chunk. These must always match,
     since the fanout is just slicing up the index.

       As a side note, the midx and pack idx code compute it the other
       way around: they use the final fanout value as the object count, and
       check the index size against it. Either is valid; if they
       disagree we cannot know which is wrong (a corrupted fanout value,
       or a too-small table of oids).

  2. We can quickly scan the fanout table to make sure it is
     monotonically increasing. If it is, then we know that every value
     is less than or equal to the final value, and therefore less than
     or equal to the table size.

     It would also be sufficient to just check that each fanout value is
     smaller than the final one, but the midx and pack idx code both do
     a full monotonicity check. It's the same cost, and it catches some
     other corruptions (though not all; the checks done by "commit-graph
     verify" are more complete but more expensive, and our goal here is
     to be fast and memory-safe).

There are two new tests. One just checks the final fanout value (this is
the mirror image of the "too small oid lookup" case added for the midx
in the previous commit; it's flipped here because commit-graph considers
the oid lookup chunk to be the source of truth).

The other actually creates a fanout with many out-of-bounds entries, and
prior to this patch, it does cause the segfault you'd expect. But note
that the error is not "your fanout entry is out-of-bounds", but rather
"fanout value out of order". That's because we leave the final fanout
value in place (to get past the table size check), making the index
non-monotonic (the second-to-last entry is big, but the last one must
remain small to match the actual table).

We need adjustments to a few existing tests, as well:

  - an earlier test in t5318 corrupts the fanout and runs "commit-graph
    verify". Its message is now changed, since we catch the problem
    earlier (during the load step, rather than the careful validation
    step).

  - in t5324, we test that "commit-graph verify --shallow" does not do
    expensive verification on the base file of the chain. But the
    corruption it uses (munging a byte at offset 1000) happens to be in
    the middle of the fanout table. And now we detect that problem in
    the cheaper checks that are performed for every part of the graph.
    We'll push this back to offset 1500, which is only caught by the
    more expensive checksum validation.

    Likewise, there's a later test in t5324 which munges an offset 100
    bytes into a file (also in the fanout table) that is referenced by
    an alternates file. So we now find that corruption during the load
    step, rather than the verification step. At the very least we need
    to change the error message (like the case above in t5318). But it
    is probably good to make sure we handle all parts of the
    verification even for alternate graph files. So let's likewise
    corrupt byte 1500 and make sure we found the invalid checksum.

Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2023-10-09 15:55:00 -07:00
Jeff King 52e2e8d43d commit-graph: check size of oid fanout chunk
We load the oid fanout chunk with pair_chunk(), which means we never see
the size of the chunk. We just assume the on-disk file uses the
appropriate size, and if it's too small we'll access random memory.

It's easy to check this up-front; the fanout always consists of 256
uint32's, since it is a fanout of the first byte of the hash pointing
into the oid index. These parameters can't be changed without
introducing a new chunk type.

This matches the similar check in the midx OIDF chunk (but note that
rather than checking for the error immediately, the graph code just
leaves parts of the struct NULL and checks for required fields later).

Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2023-10-09 15:55:00 -07:00
Taylor Blau db6044d762 commit-graph: avoid repeated mixed generation number warnings
When validating that a commit-graph has either all zero, or all non-zero
generation numbers, we emit a warning on both the rising and falling
edge of transitioning between the two.

So if we are unfortunate enough to see a commit-graph which has a
repeating sequence of zero, then non-zero generation numbers, we'll
generate many warnings that contain more or less the same information.

Avoid this by keeping track of a single example for a commit with zero-
and non-zero generation, and emit a single warning at the end of
verification if both are non-NULL.

Co-authored-by: Jeff King <peff@peff.net>
Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2023-08-21 16:16:23 -07:00
Taylor Blau ce7629a315 t/t5318-commit-graph.sh: test generation zero transitions during fsck
The second test called "detect incorrect generation number" asserts that
we correctly warn during an fsck when we see a non-zero generation
number after seeing a zero beforehand.

The other transition (going from non-zero to zero) was previously
untested. Test both directions, and rename the existing test to make
clear which direction it is exercising.

Signed-off-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2023-08-21 16:07:34 -07:00
Taylor Blau 868c991155 commit-graph: introduce commit_graph_generation_from_graph()
In 2ee11f7261 (commit-graph: return generation from memory, 2023-03-20),
the `commit_graph_generation()` function stopped returning zeros when
asked to locate the generation number of a given commit.

This was done at the time to prepare for a later change which set
generation values in memory, meaning that we could no longer rely on
`graph_pos` alone to tell us whether or not to trust the generation
number returned by this function.

In 2ee11f7261, it was noted that this change only impacted very old
commit-graphs, which were written with all commits having generation
number 0. Indeed, zero is not a valid generation number, so we should
never expect to see that value outside of the aforementioned case.

The test fallout in 2ee11f7261 indicated that we were no longer able to
fsck a specific old case of commit-graph corruption, where we see a
non-zero generation number after having seen a generation number of 0
earlier.

Introduce a variant of `commit_graph_generation()` which behaves like
that function did prior to 2ee11f7261, known as
`commit_graph_generation_from_graph()`. Then use this function in the
context of `verify_one_commit_graph()`, where we only want to trust the
values from the graph.

Signed-off-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2023-08-21 16:07:33 -07:00
Taylor Blau 51550d03e4 t5318: avoid top-level directory changes
Avoid changing the current working directory from outside of a sub-shell
during the tests in t5318.

Each test has mostly straightforward changes, either:

  - Removing the top-level `cd "$TRASH_DIRECTORY/full"`, which is
    unnecessary after ensuring that other tests don't change their
    working directory outside of a sub-shell.

  - Changing any Git invocations which want to be in a sub-directory by
    either (a) adding a "-C $DIR" argument, or (b) moving the whole test
    into a sub-shell.

While we're here, remove any explicit "git config core.commitGraph true"
invocations which were designed to enable use of the commit-graph. These
are unnecessary following 31b1de6a09 (commit-graph: turn on
commit-graph by default, 2019-08-13).

Signed-off-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2023-07-24 14:35:22 -07:00
Taylor Blau eda206f611 fsck: suppress commit-graph output with --no-progress
Since e0fd51e1d7 (fsck: verify commit-graph, 2018-06-27), `fsck` runs
`git commit-graph verify` to check the integrity of any commit-graph(s).

Originally, the `git commit-graph verify` step would always print to
stdout/stderr, regardless of whether or not `fsck` was invoked with
`--[no-]progress` or not. But in 7371612255 (commit-graph: add
--[no-]progress to write and verify, 2019-08-26), the commit-graph
machinery learned the `--[no-]progress` option, though `fsck` was not
updated to pass this new flag (or not).

This led to seeing output from running `git fsck`, even with
`--no-progress` on repositories that have a commit-graph:

    $ git.compile fsck --connectivity-only --no-progress --no-dangling
    Verifying commits in commit graph: 100% (4356/4356), done.
    Verifying commits in commit graph: 100% (131912/131912), done.

Ensure that `fsck` passes `--[no-]progress` as appropriate when calling
`git commit-graph verify`.

Signed-off-by: Taylor Blau <me@ttaylorr.com>
Acked-by: Derrick Stolee <derrickstolee@github.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2023-07-10 10:02:37 -07:00
Derrick Stolee 2ee11f7261 commit-graph: return generation from memory
The commit_graph_generation() method used to report a value of
GENERATION_NUMBER_INFINITY if the commit_graph_data_slab had an instance
for the given commit but the graph_pos indicated the commit was not in
the commit-graph file.

However, an upcoming change will introduce the ability to set generation
values in-memory without writing the commit-graph file. Thus, we can no
longer trust 'graph_pos' to indicate whether or not the generation
member can be trusted.

Instead, trust the 'generation' member if the commit has a value in the
slab _and_ the 'generation' member is non-zero. Otherwise, treat it as
GENERATION_NUMBER_INFINITY.

This only makes a difference for a very old case for the commit-graph:
the very first Git release to write commit-graph files wrote zeroes in
the topological level positions. If we are parsing a commit-graph with
all zeroes, those commits will now appear to have
GENERATION_NUMBER_INFINITY (as if they were not parsed from the
commit-graph).

I attempted several variations to work around the need for providing an
uninitialized 'generation' member, but this was the best one I found. It
does require a change to a verification test in t5318 because it reports
a different error than the one about non-zero generation numbers.

Signed-off-by: Derrick Stolee <derrickstolee@github.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2023-03-20 12:17:33 -07:00
Junio C Hamano d528044c83 Merge branch 'sg/parse-options-subcommand'
Introduce the "subcommand" mode to parse-options API and update the
command line parser of Git commands with subcommands.

* sg/parse-options-subcommand: (23 commits)
  remote: run "remote rm" argv through parse_options()
  maintenance: add parse-options boilerplate for subcommands
  pass subcommand "prefix" arguments to parse_options()
  builtin/worktree.c: let parse-options parse subcommands
  builtin/stash.c: let parse-options parse subcommands
  builtin/sparse-checkout.c: let parse-options parse subcommands
  builtin/remote.c: let parse-options parse subcommands
  builtin/reflog.c: let parse-options parse subcommands
  builtin/notes.c: let parse-options parse subcommands
  builtin/multi-pack-index.c: let parse-options parse subcommands
  builtin/hook.c: let parse-options parse subcommands
  builtin/gc.c: let parse-options parse 'git maintenance's subcommands
  builtin/commit-graph.c: let parse-options parse subcommands
  builtin/bundle.c: let parse-options parse subcommands
  parse-options: add support for parsing subcommands
  parse-options: drop leading space from '--git-completion-helper' output
  parse-options: clarify the limitations of PARSE_OPT_NODASH
  parse-options: PARSE_OPT_KEEP_UNKNOWN only applies to --options
  api-parse-options.txt: fix description of OPT_CMDMODE
  t0040-parse-options: test parse_options() with various 'parse_opt_flags'
  ...
2022-09-01 13:40:18 -07:00
SZEDER Gábor 1c3b05170a builtin/commit-graph.c: let parse-options parse subcommands
'git commit-graph' parses its subcommands with an if-else if
statement.  parse-options has just learned to parse subcommands, so
let's use that facility instead, with the benefits of shorter code,
handling missing or unknown subcommands, and listing subcommands for
Bash completion.

Note that the functions implementing each subcommand only accept the
'argc' and '**argv' parameters, so add a (unused) '*prefix' parameter
to make them match the type expected by parse-options, and thus avoid
casting function pointers.

Signed-off-by: SZEDER Gábor <szeder.dev@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2022-08-19 11:13:15 -07:00
Junio C Hamano 37e4bdd5ee Merge branch 'tb/commit-graph-genv2-upgrade-fix'
There was a bug in the codepath to upgrade generation information
in commit-graph from v1 to v2 format, which has been corrected.

* tb/commit-graph-genv2-upgrade-fix:
  commit-graph: fix corrupt upgrade from generation v1 to v2
  commit-graph: introduce `repo_find_commit_pos_in_graph()`
  t5318: demonstrate commit-graph generation v2 corruption
2022-08-03 13:36:08 -07:00
Taylor Blau 9550f6c16a commit-graph: fix corrupt upgrade from generation v1 to v2
The previous commit demonstrates a bug where a commit-graph using
generation v2 could enter a state where one of the GDA2 values has its
most-significant bit set (indicating that its value should be read from
the extended offset table in the GDO2 chunk) without having a GDO2 chunk
to read from.

This results in the following error message being displayed to the
caller:

    fatal: commit-graph requires overflow generation data but has none

This bug arises in the following scenario:

  - We decide to write a commit-graph using generation number v2, and
    decide (correctly) that no GDO2 chunk is necessary (e.g., because
    all of the commiter date offsets are no larger than 2^31-1).

  - The v2 generation numbers are stored in the `->generation` member of
    the commit slab holding `struct commit_graph_data`'s.

  - Later on, `load_commit_graph_info()` is called, overwriting the
    v2 generation data in the aforementioned slab with any existing v1
    generation data.

Then, when the commit-graph code goes to write the GDA2 chunk via
`write_graph_chunk_generation_data()`, we use the overwritten generation
v1 data in a place where we expect to use a v2 generation number:

    offset = commit_graph_data_at(c)->generation - c->date;

...because `commit_graph_data_at(c)->generation` used to hold the v2
generation data, but it was overwritten to contain the v1 generation
number via `load_commit_graph_info()`.

If the `offset` computation above overflows the v2 generation number
max, then `write_graph_chunk_generation_data()` will update its count of
large offsets and write the marker accordingly:

    if (offset > GENERATION_NUMBER_V2_OFFSET_MAX) {
        offset = CORRECTED_COMMIT_DATE_OFFSET_OVERFLOW | num_generation_data_overflows;
        num_generation_data_overflows++;
    }

and reads will look for the GDO2 chunk containing the overflowing v2
generation number, *after* the commit-graph code decided that no such
chunk was necessary.

The main problem is that the slab containing `struct commit_graph_data`
has a dual purpose. It is used to hold data that we are about to write
to disk while generating a commit-graph, as well as hold data that was
read from an existing commit-graph.

When the two mix, namely when the result of reading the commit-graph has
a side-effect that mixes poorly with an in-progress commit-graph write,
we end up with corrupt data.

A complete fix might be to introduce a new slab that is used exclusively
for writing, and gate access between the two slabs based on context
provided by the caller (e.g., whether this computation is part of a
"read" or "write" operation).

But a more minimal fix addresses the only known path which overwrites
the slab data, which is `compute_bloom_filters()` ->
`get_or_compute_bloom_filter()` -> `load_commit_graph_info()` ->
`fill_commit_graph_info()` by avoiding the last call which clobbers the
data altogether.

This path only needs to learn the graph position of a given commit so
that it can be used in `load_bloom_filter_from_graph()`. By replacing
the last steps of the above with one that records the graph position
into a temporary variable which is then used to load the existing Bloom
data, we eliminate the clobbering, removing the corruption.

Signed-off-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2022-07-15 16:51:39 -07:00
Taylor Blau 2dd804cd12 t5318: demonstrate commit-graph generation v2 corruption
When upgrading a commit-graph using generation v1 to one using
generation v2, it is possible to force Git into a corrupt state where it
(incorrectly) believes that a GDO2 chunk is necessary, *after* deciding
not to write one.

This makes subsequent reads using the commit-graph produce the following
error message:

    fatal: commit-graph requires overflow generation data but has none

Demonstrate this bug by increasing our test coverage to include a
minimal example of upgrading a commit-graph from generation v1 to v2.
The only notable components of this test are:

  - The committer date of the commit is chosen carefully so that the
    offset underflows when computed using a v1 generation number, but
    would not overflow when using v2 generation numbers.

  - The upgrade to generation number v2 must read in the v1 generation
    numbers, which we can do by passing `--changed-paths`, which will
    force the commit-graph internals to call `fill_commit_graph_info()`.

A future patch will squash this bug.

Reported-by: Jeff King <peff@peff.net>
Reproduced-by: Will Chandler <wfc@wfchandler.org>
Signed-off-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2022-07-15 16:51:38 -07:00
Ævar Arnfjörð Bjarmason 93e02b6e1e tests: don't assume a .git/info for .git/info/grafts
Change those tests that assumed that a .git/info directory would be
created for them when writing .git/info/grafts to explicitly create
the directory.

Do this using the new "TEST_CREATE_REPO_NO_TEMPLATE" facility, and use
"mkdir" instead of "mkdir -p" to assert that we don't have the
.git/info already. An exception to this is the "with grafts" test in
"t6001-rev-list-graft.sh". There we're modifying our ".git" state in a
for-loop, in lieu of refactoring that more extensively let's use
"mkdir -p" there.

Signed-off-by: Ævar Arnfjörð Bjarmason <avarab@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2022-06-06 12:00:21 -07:00
Derrick Stolee 3b0199d4c3 commit-graph: start parsing generation v2 (again)
The 'read_generation_data' member of 'struct commit_graph' was
introduced by 1fdc383c5 (commit-graph: use generation v2 only if entire
chain does, 2021-01-16). The intention was to avoid using corrected
commit dates if not all layers of a commit-graph had that data stored.
The logic in validate_mixed_generation_chain() at that point incorrectly
initialized read_generation_data to 1 if and only if the tip
commit-graph contained the Corrected Commit Date chunk.

This was "fixed" in 448a39e65 (commit-graph: validate layers for
generation data, 2021-02-02) to validate that read_generation_data was
either non-zero for all layers, or it would set read_generation_data to
zero for all layers.

The problem here is that read_generation_data is not initialized to be
non-zero anywhere!

This change initializes read_generation_data immediately after the chunk
is parsed, so each layer will have its value present as soon as
possible.

The read_generation_data member is used in fill_commit_graph_info() to
determine if we should use the corrected commit date or the topological
levels stored in the Commit Data chunk. Due to this bug, all previous
versions of Git were defaulting to topological levels in all cases!

This can be measured with some performance tests. Using the Linux kernel
as a testbed, I generated a complete commit-graph containing corrected
commit dates and tested the 'new' version against the previous, 'old'
version.

First, rev-list with --topo-order demonstrates a 26% improvement using
corrected commit dates:

hyperfine \
	-n "old" "$OLD_GIT rev-list --topo-order -1000 v3.6" \
	-n "new" "$NEW_GIT rev-list --topo-order -1000 v3.6" \
	--warmup=10

Benchmark 1: old
  Time (mean ± σ):      57.1 ms ±   3.1 ms
  Range (min … max):    52.9 ms …  62.0 ms    55 runs

Benchmark 2: new
  Time (mean ± σ):      45.5 ms ±   3.3 ms
  Range (min … max):    39.9 ms …  51.7 ms    59 runs

Summary
  'new' ran
    1.26 ± 0.11 times faster than 'old'

These performance improvements are due to the algorithmic improvements
given by walking fewer commits due to the higher cutoffs from corrected
commit dates.

However, this comes at a cost. The additional I/O cost of parsing the
corrected commit dates is visible in case of merge-base commands that do
not reduce the overall number of walked commits.

hyperfine \
        -n "old" "$OLD_GIT merge-base v4.8 v4.9" \
        -n "new" "$NEW_GIT merge-base v4.8 v4.9" \
        --warmup=10

Benchmark 1: old
  Time (mean ± σ):     110.4 ms ±   6.4 ms
  Range (min … max):    96.0 ms … 118.3 ms    25 runs

Benchmark 2: new
  Time (mean ± σ):     150.7 ms ±   1.1 ms
  Range (min … max):   149.3 ms … 153.4 ms    19 runs

Summary
  'old' ran
    1.36 ± 0.08 times faster than 'new'

Performance issues like this are what motivated 702110aac (commit-graph:
use config to specify generation type, 2021-02-25).

In the future, we could fix this performance problem by inserting the
corrected commit date offsets into the Commit Date chunk instead of
having that data in an extra chunk.

Signed-off-by: Derrick Stolee <derrickstolee@github.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2022-03-01 12:15:06 -08:00
Derrick Stolee 75979d9460 commit-graph: fix ordering bug in generation numbers
When computing the generation numbers for a commit-graph, we compute
the corrected commit dates and then check if their offsets from the
actual dates is too large to fit in the 32-bit Generation Data chunk.
However, there is a problem with this approach: if we have parsed the
generation data from the previous commit-graph, then we continue the
loop because the corrected commit date is already computed. This causes
an under-count in the number of overflow values.

It is incorrect to add an increment to num_generation_data_overflows
next to this 'continue' statement, because we might start
double-counting commits that are computed because of the depth-first
search walk from a commit with an earlier OID.

Instead, iterate over the full commit list at the end, checking the
offsets to see how many grow beyond the maximum value.

Create a new t5328-commit-graph-64-bit-time.sh test script to handle
special cases of testing 64-bit timestamps. This helps demonstrate this
bug in more cases. It still won't hit all potential cases until the next
change, which reenables reading generation numbers. Use the skip_all
trick from 0a2bfccb9c (t0051: use "skip_all" under !MINGW in
single-test file, 2022-02-04) to make the output clean when run on a
32-bit system.

Helped-by: Ævar Arnfjörð Bjarmason <avarab@gmail.com>
Signed-off-by: Derrick Stolee <derrickstolee@github.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2022-03-01 12:14:57 -08:00
Derrick Stolee 17925e0602 t5318: extract helpers to lib-commit-graph.sh
The graph_git_behavior helper is useful for testing that certain Git
commands behave the same when using the commit-graph and when not using
the commit-graph. Extract it to a new lib-commit-graph.sh file for use
in new test scripts that will split out from t5318.

While doing this extraction, also extract graph_read_expect and the
logic for priming the test_oid_cache.

Signed-off-by: Derrick Stolee <derrickstolee@github.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2022-03-01 12:09:55 -08:00
Derrick Stolee c78c7a959c test-read-graph: include extra post-parse info
It can be helpful to verify that the 'struct commit_graph' that results
from parsing a commit-graph is correctly structured. The existence of
different chunks is not enough to verify that all of the optional
features are correctly enabled.

Update 'test-tool read-graph' to output an "options:" line that includes
information for different parts of the struct commit_graph.

In particular, this change demonstrates that the read_generation_data
option is never being enabled, which will be fixed in a later change.

Signed-off-by: Derrick Stolee <derrickstolee@github.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2022-03-01 12:09:55 -08:00
Eric Sunshine d0fd993137 t5000-t5999: detect and signal failure within loop
Failures within `for` and `while` loops can go unnoticed if not detected
and signaled manually since the loop itself does not abort when a
contained command fails, nor will a failure necessarily be detected when
the loop finishes since the loop returns the exit code of the last
command it ran on the final iteration, which may not be the command
which failed. Therefore, detect and signal failures manually within
loops using the idiom `|| return 1` (or `|| exit 1` within subshells).

Signed-off-by: Eric Sunshine <sunshine@sunshineco.com>
Reviewed-by: Elijah Newren <newren@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2021-12-13 10:29:48 -08:00
Glen Choo f30e4d854b fsck: verify commit graph when implicitly enabled
Change fsck to check the "core_commit_graph" variable set in
"repo-settings.c" instead of reading the "core.commitGraph" variable.
This fixes a bug where we wouldn't verify the commit-graph if the
config key was missing. This bug was introduced in
31b1de6a09 (commit-graph: turn on commit-graph by default, 2019-08-13),
where core.commitGraph was turned on by default.

Add tests to "t5318-commit-graph.sh" to verify that fsck checks the
commit-graph as expected for the 3 values of core.commitGraph. Also,
disable GIT_TEST_COMMIT_GRAPH in t/t0410-partial-clone.sh because some
test cases use fsck in ways that assume that commit-graph checking is
disabled.

Helped-by: Ævar Arnfjörð Bjarmason <avarab@gmail.com>
Signed-off-by: Glen Choo <chooglen@google.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2021-10-15 14:30:07 -07:00
Junio C Hamano ed41385ad6 Merge branch 'ab/ignore-replace-while-working-on-commit-graph' into gc/use-repo-settings
* ab/ignore-replace-while-working-on-commit-graph:
  commit-graph: don't consider "replace" objects with "verify"
  commit-graph tests: fix another graph_git_two_modes() helper
  commit-graph tests: fix error-hiding graph_git_two_modes() helper
2021-10-15 14:30:00 -07:00
Ævar Arnfjörð Bjarmason 095d112f8c commit-graph: don't consider "replace" objects with "verify"
Extend the code added in d6538246d3 (commit-graph: not compatible
with replace objects, 2018-08-20) which ignored replace objects in the
"write" command to ignore it in the "verify" command too.

We can just move this assignment to the cmd_commit_graph(), it
dispatches to "write" and "verify", and we're unlikely to ever get a
sub-command that would like to consider replace refs.

This will make tests added in eddc1f556c (mktag tests: test
update-ref and reachable fsck, 2021-06-17) pass in combination with
the "GIT_TEST_COMMIT_GRAPH" mode added in 859fdc0c3c (commit-graph:
define GIT_TEST_COMMIT_GRAPH, 2018-08-29), except that mode is
currently broken (but is being fixed concurrently). See the discussion
starting at [1].

1. https://lore.kernel.org/git/87wnmihswp.fsf@evledraar.gmail.com/

Signed-off-by: Ævar Arnfjörð Bjarmason <avarab@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2021-10-15 09:21:30 -07:00
Ævar Arnfjörð Bjarmason 3247919a75 commit-graph tests: fix error-hiding graph_git_two_modes() helper
The graph_git_two_modes() helper added in 177722b344 (commit:
integrate commit graph with commit parsing, 2018-04-10) didn't
&&-chain its "git commit-graph" invocations, which as can be seen with
SANITIZE=leak will happily mark tests as passing if both of these
commands die, since test_cmp() will be comparing two empty files.

Signed-off-by: Ævar Arnfjörð Bjarmason <avarab@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2021-10-15 09:21:30 -07:00
Ævar Arnfjörð Bjarmason 367c5f36a6 commit-graph: show "unexpected subcommand" error
Bring the "commit-graph" command in line with the error output and
general pattern in cmd_multi_pack_index().

Let's test for that output, and also cover the same potential bug as
was fixed in the multi-pack-index command in
88617d11f9 (multi-pack-index: fix potential segfault without
sub-command, 2021-07-19).

Signed-off-by: Ævar Arnfjörð Bjarmason <avarab@gmail.com>
Reviewed-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2021-08-30 17:06:18 -07:00
Ævar Arnfjörð Bjarmason 6d209a01f8 commit-graph: show usage on "commit-graph [write|verify] garbage"
Change the parse_options() invocation in the commit-graph code to
error on unknown leftover argv elements, in addition to the existing
and implicit erroring via parse_options() on unknown options.

We'd already error in cmd_commit_graph() on e.g.:

    git commit-graph unknown verify
    git commit-graph --unknown verify

But here we're calling parse_options() twice more for the "write" and
"verify" subcommands. We did not do the same checking for leftover
argv elements there. As a result we'd silently accept garbage in these
subcommands, let's not do that.

Signed-off-by: Ævar Arnfjörð Bjarmason <avarab@gmail.com>
Reviewed-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2021-08-30 17:06:18 -07:00
Junio C Hamano d20fa3cf9d Merge branch 'ds/commit-graph-generation-config'
A new configuration variable has been introduced to allow choosing
which version of the generation number gets used in the
commit-graph file.

* ds/commit-graph-generation-config:
  commit-graph: use config to specify generation type
  commit-graph: create local repository pointer
2021-03-22 14:00:23 -07:00
Junio C Hamano 660dd97a62 Merge branch 'ds/chunked-file-api'
The common code to deal with "chunked file format" that is shared
by the multi-pack-index and commit-graph files have been factored
out, to help codepaths for both filetypes to become more robust.

* ds/chunked-file-api:
  commit-graph.c: display correct number of chunks when writing
  chunk-format: add technical docs
  chunk-format: restore duplicate chunk checks
  midx: use 64-bit multiplication for chunk sizes
  midx: use chunk-format read API
  commit-graph: use chunk-format read API
  chunk-format: create read chunk API
  midx: use chunk-format API in write_midx_internal()
  midx: drop chunk progress during write
  midx: return success/failure in chunk write methods
  midx: add num_large_offsets to write_midx_context
  midx: add pack_perm to write_midx_context
  midx: add entries to write_midx_context
  midx: use context in write_midx_pack_names()
  midx: rename pack_info to write_midx_context
  commit-graph: use chunk-format write API
  chunk-format: create chunk format write API
  commit-graph: anonymize data in chunk_write_fn
2021-03-01 14:02:57 -08:00
Derrick Stolee 702110aac6 commit-graph: use config to specify generation type
We have two established generation number versions:

 1: topological levels
 2: corrected commit dates

The corrected commit dates are enabled by default, but they also write
extra data in the GDAT and GDOV chunks. Services that host Git data
might want to have more control over when this feature rolls out than
just updating the Git binaries.

Add a new "commitGraph.generationVersion" config option that specifies
the intended generation number version. If this value is less than 2,
then the GDAT chunk is never written _or read_ from an existing file.

This can replace our use of the GIT_TEST_COMMIT_GRAPH_NO_GDAT
environment variable in the test suite. Remove it.

Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2021-02-25 15:10:41 -08:00
Junio C Hamano d68fccef86 Merge branch 'ab/test-lib'
Test framework clean-up.

* ab/test-lib:
  test-lib-functions: assert correct parameter count
  test-lib-functions: remove bug-inducing "diagnostics" helper param
  test libs: rename "diff-lib" to "lib-diff"
  t/.gitattributes: sort lines
  test-lib-functions: move function to lib-bitmap.sh
  test libs: rename gitweb-lib.sh to lib-gitweb.sh
  test libs: rename bundle helper to "lib-bundle.sh"
  test-lib-functions: remove generate_zero_bytes() wrapper
  test-lib-functions: move test_set_index_version() to its user
  test lib: change "error" to "BUG" as appropriate
  test-lib: remove check_var_migration
2021-02-22 16:12:43 -08:00
Derrick Stolee 2692c2f6fd commit-graph: use chunk-format read API
Instead of parsing the table of contents directly, use the chunk-format
API methods read_table_of_contents() and pair_chunk(). While the current
implementation loses the duplicate-chunk detection, that will be added
in a future change.

Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2021-02-18 13:38:16 -08:00
Ævar Arnfjörð Bjarmason f3ad2bf471 test-lib-functions: remove generate_zero_bytes() wrapper
Since d5cfd142ec (tests: teach the test-tool to generate NUL bytes
and use it, 2019-02-14) the generate_zero_bytes() functions has been a
thin wrapper for "test-tool genzeros". Let's have its only user call
that directly instead.

Signed-off-by: Ævar Arnfjörð Bjarmason <avarab@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2021-02-10 13:54:34 -08:00
Derrick Stolee bc50d6c91f commit-graph: prepare commit graph
Before checking if the repository has a commit-graph loaded, be sure
to run prepare_commit_graph(). This is necessary because otherwise
the topo_levels slab is not initialized. As we compute topo_levels for
the new commits, we iterate further into the lower layers since the
first visit to each commit looks as though the topo_level is not
populated.

By properly initializing the topo_slab, we fix the previously broken
case of a split commit graph where a base layer has the
generation_data_overflow chunk.

Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Reviewed-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2021-02-01 21:03:36 -08:00
Derrick Stolee 90cb1c47c7 commit-graph: always parse before commit_graph_data_at()
There is a subtle failure happening when computing corrected commit
dates with --split enabled. It requires a base layer needing the
generation_data_overflow chunk. Then, the next layer on top
erroneously thinks it needs an overflow chunk due to a bug leading
to recalculating all reachable generation numbers. The output of
the failure is

  BUG: commit-graph.c:1912: expected to write 8 bytes to
  chunk 47444f56, but wrote 0 instead

These "expected" 8 bytes are due to re-computing the corrected
commit date for the lower layer but the new layer does not need
any overflow.

Add a test to t5318-commit-graph.sh that demonstrates this bug. However,
it does not trigger consistently with the existing code.

The generation number data is stored in a slab and accessed by
commit_graph_data_at(). This data is initialized when parsing a commit,
but is otherwise used assuming it has been populated. The loop in
compute_generation_numbers() did not enforce that all reachable
commits were parsed and had correct values. This could lead to some
problems when writing a commit-graph with corrected commit dates based
on a commit-graph without them.

It has been difficult to identify the issue here because it was so hard
to reproduce. It relies on this uninitialized data having a non-zero
value, but also on specifically in a way that overwrites the existing
data.

This patch adds the extra parse to ensure the data is filled before we
compute the generation number of a commit. This triggers the new test
to fail because the generation number overflow count does not match
between this computation and the write for that chunk.

The actual fix will follow as the next few changes.

Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Reviewed-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2021-02-01 21:03:36 -08:00
Abhishek Kumar e8b63005c4 commit-graph: implement generation data chunk
As discovered by Ævar, we cannot increment graph version to
distinguish between generation numbers v1 and v2 [1]. Thus, one of
pre-requistes before implementing generation number v2 was to
distinguish between graph versions in a backwards compatible manner.

We are going to introduce a new chunk called Generation DATa chunk (or
GDAT). GDAT will store corrected committer date offsets whereas CDAT
will still store topological level.

Old Git does not understand GDAT chunk and would ignore it, reading
topological levels from CDAT. New Git can parse GDAT and take advantage
of newer generation numbers, falling back to topological levels when
GDAT chunk is missing (as it would happen with a commit-graph written
by old Git).

We introduce a test environment variable 'GIT_TEST_COMMIT_GRAPH_NO_GDAT'
which forces commit-graph file to be written without generation data
chunk to emulate a commit-graph file written by old Git.

To minimize the space required to store corrrected commit date, Git
stores corrected commit date offsets into the commit-graph file, instea
of corrected commit dates. This saves us 4 bytes per commit, decreasing
the GDAT chunk size by half, but it's possible for the offset to
overflow the 4-bytes allocated for storage. As such overflows are and
should be exceedingly rare, we use the following overflow management
scheme:

We introduce a new commit-graph chunk, Generation Data OVerflow ('GDOV')
to store corrected commit dates for commits with offsets greater than
GENERATION_NUMBER_V2_OFFSET_MAX.

If the offset is greater than GENERATION_NUMBER_V2_OFFSET_MAX, we set
the MSB of the offset and the other bits store the position of corrected
commit date in GDOV chunk, similar to how Extra Edge List is maintained.

We test the overflow-related code with the following repo history:

           F - N - U
          /         \
U - N - U            N
         \          /
	  N - F - N

Where the commits denoted by U have committer date of zero seconds
since Unix epoch, the commits denoted by N have committer date of
1112354055 (default committer date for the test suite) seconds since
Unix epoch and the commits denoted by F have committer date of
(2 ^ 31 - 2) seconds since Unix epoch.

The largest offset observed is 2 ^ 31, just large enough to overflow.

[1]: https://lore.kernel.org/git/87a7gdspo4.fsf@evledraar.gmail.com/

Signed-off-by: Abhishek Kumar <abhishekkumar8222@gmail.com>
Reviewed-by: Taylor Blau <me@ttaylorr.com>
Reviewed-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2021-01-18 16:21:18 -08:00
Derrick Stolee 665d70ad03 commit-graph: use the "hash version" byte
The commit-graph format reserved a byte among the header of the file to
store a "hash version". During the SHA-256 work, this was not modified
because file formats are not necessarily intended to work across hash
versions. If a repository has SHA-256 as its hash algorithm, it
automatically up-shifts the lengths of object names in all necessary
formats.

However, since we have this byte available for adjusting the version, we
can make the file formats more obviously incompatible instead of relying
on other context from the repository.

Update the oid_version() method in commit-graph.c to add a new value, 2,
for sha-256. This automatically writes the new value in a SHA-256
repository _and_ verifies the value is correct. This is a breaking
change relative to the current 'master' branch since 092b677 (Merge
branch 'bc/sha-256-cvs-svn-updates', 2020-08-13) but it is not breaking
relative to any released version of Git.

The test impact is relatively minor: the output of 'test-tool
read-graph' lists the header information, so those instances of '1' need
to be replaced with a variable determined by GIT_TEST_DEFAULT_HASH. A
more careful test is added that specifically creates a repository of
each type then swaps the commit-graph files. The important value here is
that the "git log" command succeeds while writing a message to stderr.

Helped-by: brian m. carlson <sandals@crustytoothpaste.net>
Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Reviewed-by: brian m. carlson <sandals@crustytoothpaste.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-08-17 16:45:14 -07:00
Junio C Hamano e0ad9574dd Merge branch 'bc/sha-256-part-3'
The final leg of SHA-256 transition.

* bc/sha-256-part-3: (39 commits)
  t: remove test_oid_init in tests
  docs: add documentation for extensions.objectFormat
  ci: run tests with SHA-256
  t: make SHA1 prerequisite depend on default hash
  t: allow testing different hash algorithms via environment
  t: add test_oid option to select hash algorithm
  repository: enable SHA-256 support by default
  setup: add support for reading extensions.objectformat
  bundle: add new version for use with SHA-256
  builtin/verify-pack: implement an --object-format option
  http-fetch: set up git directory before parsing pack hashes
  t0410: mark test with SHA1 prerequisite
  t5308: make test work with SHA-256
  t9700: make hash size independent
  t9500: ensure that algorithm info is preserved in config
  t9350: make hash size independent
  t9301: make hash size independent
  t9300: use $ZERO_OID instead of hard-coded object ID
  t9300: abstract away SHA-1-specific constants
  t8011: make hash size independent
  ...
2020-08-11 18:04:11 -07:00