The helper used to iterate over loose object directories to prune
stale objects did not closedir() immediately when it is done with a
directory--a callback such as the one used for "git prune" may want
to do rmdir(), but it would fail on open directory on platforms
such as WinXP.
* jk/prune-mtime:
prune: close directory earlier during loose-object directory traversal
Having a leftover .idx file without corresponding .pack file in
the repository hurts performance; "git gc" learned to prune them.
We may want to do the same for .bitmap (and notice but not prune
.keep) without corresponding .pack, but that can be a separate
topic.
* dk/gc-idx-wo-pack:
gc: remove garbage .idx files from pack dir
t5304: test cleaning pack garbage
prepare_packed_git(): refactor garbage reporting in pack directory
Various compilation fixes and squelching of warnings.
* js/misc-fixes:
Correct fscanf formatting string for I64u values
Silence GCC's "cast of pointer to integer of a different size" warning
Squelch warning about an integer overflow
"git clone --dissociate" runs a big "git repack" process at the
end, and it helps to close file descriptors that are open on the
packs and their idx files before doing so on filesystems that
cannot remove a file that is still open.
* js/clone-dissociate:
clone --dissociate: avoid locking pack files
sha1_file.c: add a function to release all packs
sha1_file: consolidate code to close a pack's file descriptor
t5700: demonstrate a Windows file locking issue with `git clone --dissociate`
When calculating hashes from pointers, it actually makes sense to cut
off the most significant bits. In that case, said warning does not make
a whole lot of sense.
So let's just work around it by casting the pointer first to intptr_t
and then casting up/down to the final integral type.
Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
On Windows, files that are in use cannot be removed or renamed. That
means that we have to release pack files when we are about to, say,
repack them. Let's introduce a convenient function to close all the
pack files and their idx files.
While at it, we consolidate the close windows/close fd/close index
stanza in `free_pack_by_name()` into the `close_pack()` function that
is used by the new `close_all_packs()` function to avoid repeated code.
Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
There was a lot of repeated code to close the file descriptor of
a given pack. Let's just refactor this code into a single function.
Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
This function assumes that the relative_base path passed
into it is no larger than PATH_MAX, and writes into a
fixed-size buffer. However, this path may not have actually
come from the filesystem; for example, add_submodule_odb
generates a path using a strbuf and passes it in. This is
hard to trigger in practice, though, because the long
submodule directory would have to exist on disk before we
would try to open its info/alternates file.
We can easily avoid the bug, though, by simply creating the
filename on the heap.
Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
When trying to see that an object does not exist, a state errno
leaked from our "first try to open a packfile with O_NOATIME and
then if it fails retry without it" logic on a system that refuses
O_NOATIME. This confused us and caused us to die, saying that the
packfile is unreadable, when we should have just reported that the
object does not exist in that packfile to the caller.
* cb/open-noatime-clear-errno:
git_open_noatime: return with errno=0 on success
When trying to see that an object does not exist, a state errno
leaked from our "first try to open a packfile with O_NOATIME and
then if it fails retry without it" logic on a system that refuses
O_NOATIME. This confused us and caused us to die, saying that the
packfile is unreadable, when we should have just reported that the
object does not exist in that packfile to the caller.
* cb/open-noatime-clear-errno:
git_open_noatime: return with errno=0 on success
git_path() and mkpath() are handy helper functions but it is easy
to misuse, as the callers need to be careful to keep the number of
active results below 4. Their uses have been reduced.
* jk/git-path:
memoize common git-path "constant" files
get_repo_path: refactor path-allocation
find_hook: keep our own static buffer
refs.c: remove_empty_directories can take a strbuf
refs.c: avoid git_path assignment in lock_ref_sha1_basic
refs.c: avoid repeated git_path calls in rename_tmp_log
refs.c: simplify strbufs in reflog setup and writing
path.c: drop git_path_submodule
refs.c: remove extra git_path calls from read_loose_refs
remote.c: drop extraneous local variable from migrate_file
prefer mkpathdup to mkpath in assignments
prefer git_pathdup to git_path in some possibly-dangerous cases
add_to_alternates_file: don't add duplicate entries
t5700: modernize style
cache.h: complete set of git_path_submodule helpers
cache.h: clarify documentation for git_path, et al
The hook to report "garbage" files in $GIT_OBJECT_DIRECTORY/pack/
could be generic but is too specific to count-object's needs.
Move the part to produce human-readable messages to count-objects,
and refine the interface to callback with the "bits" with values
defined in the cache.h header file, so that other callers (e.g.
prune) can later use the same mechanism to enumerate different
kinds of garbage files and do something intelligent about them,
other than reporting in textual messages.
Signed-off-by: Junio C Hamano <gitster@pobox.com>
In read_sha1_file_extended we die if read_object fails with a fatal
error. We detect a fatal error if errno is non-zero and is not
ENOENT. If the object could not be read because it does not exist,
this is not considered a fatal error and we want to return NULL.
Somewhere down the line, read_object calls git_open_noatime to open
a pack index file, for example. We first try open with O_NOATIME.
If O_NOATIME fails with EPERM, we retry without O_NOATIME. When the
second open succeeds, errno is however still set to EPERM from the
first attempt. When we finally determine that the object does not
exist, read_object returns NULL and read_sha1_file_extended dies
with a fatal error:
fatal: failed to read object <sha1>: Operation not permitted
Fix this by resetting errno to zero before we call open again.
Cc: Linus Torvalds <torvalds@linux-foundation.org>
Signed-off-by: Clemens Buchacher <clemens.buchacher@intel.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
27e1e22d (prune: factor out loose-object directory traversal, 2014-10-16)
introduced a new function for_each_loose_file_in_objdir() with a helper
for_each_file_in_obj_subdir(). The latter calls callbacks for each file
found during a directory traversal and finally also a callback for the
directory itself.
git-prune uses the function to clean up the object directory. In
particular, in the directory callback it calls rmdir(). On Windows XP,
this rmdir call fails, because the directory is still open while the
callback is called. Close the directory before calling the callback.
Signed-off-by: Johannes Sixt <j6t@kdbg.org>
Acked-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
The add_to_alternates_file function blindly uses
hold_lock_file_for_append to copy the existing contents, and
then adds the new line to it. This has two minor problems:
1. We might add duplicate entries, which are ugly and
inefficient.
2. We do not check that the file ends with a newline, in
which case we would bogusly append to the final line.
This is quite unlikely in practice, though, as we call
this function only from git-clone, so presumably we are
the only writers of the file (and we always add a
newline).
Instead of using hold_lock_file_for_append, let's copy the
file line by line, which ensures all records are properly
terminated. If we see an extra line, we can simply abort the
update (there is no point in even copying the rest, as we
know that it would be identical to the original).
As a bonus, we also get rid of some calls to the
static-buffer mkpath and git_path functions.
Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
Since 5a688fe4 ("core.sharedrepository = 0mode" should set, not
loosen, 2009-03-25), we kept reminding ourselves:
NEEDSWORK: this should be renamed to finalize_temp_file() as
"moving" is only a part of what it does, when no patch between
master to pu changes the call sites of this function.
without doing anything about it. Let's do so.
The purpose of this function was not to move but to finalize. The
detail of the primarily implementation of finalizing was to link the
temporary file to its final name and then to unlink, which wasn't
even "moving". The alternative implementation did "move" by calling
rename(2), which is a fun tangent.
Signed-off-by: Junio C Hamano <gitster@pobox.com>
Disable "have we lost a race with competing repack?" check while
receiving a huge object transfer that runs index-pack.
* jk/index-pack-reduce-recheck:
index-pack: avoid excessive re-reading of pack directory
The for_each_packed_object() API function did not iterate over
objects in a packfile that hasn't been used yet.
* jk/maint-for-each-packed-object:
for_each_packed_object: automatically open pack index
When we want to write out a loose object file, we have
always first made sure we don't already have the object
somewhere. Since 33d4221 (write_sha1_file: freshen existing
objects, 2014-10-15), we also update the timestamp on the
file, so that a simultaneous prune knows somebody is
likely to reference it soon.
If our utime() call fails, we treat this the same as not
having the object in the first place; the safe thing to do
is write out another copy. However, the loose-object check
accidentally inverts the utime() check; it returns failure
_only_ when the utime() call actually succeeded. Thus it was
failing to protect us there, and in the normal case where
utime() succeeds, it caused us to pointlessly write out and
link the object.
This passed our freshening tests, because writing out the
new object is certainly _one_ way of updating its utime. So
the normal case was inefficient, but not wrong.
While we're here, let's also drop a comment in front of the
check_and_freshen functions, making a note of their return
type (since it is not our usual "0 for success, -1 for
error").
Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
The configuration reader/writer uses mmap(2) interface to access
the files; when we find a directory, it barfed with "Out of memory?".
* jk/diagnose-config-mmap-failure:
xmmap(): drop "Out of memory?"
config.c: rewrite ENODEV into EISDIR when mmap fails
config.c: avoid xmmap error messages
config.c: fix mmap leak when writing config
read-cache.c: drop PROT_WRITE from mmap of index
Disable "have we lost a race with competing repack?" check while
receiving a huge object transfer that runs index-pack.
* jk/index-pack-reduce-recheck:
index-pack: avoid excessive re-reading of pack directory
When for_each_packed_object is called, we call
prepare_packed_git() to make sure we have the actual list of
packs. But the latter does not actually open the pack
indices, meaning that pack->nr_objects may simply be 0 if
the pack has not otherwise been used since the program
started.
In practice, this didn't come up for the current callers,
because they iterate the packed objects only after iterating
all reachable objects (so for it to matter you would have to
have a pack consisting only of unreachable objects). But it
is a dangerous and confusing interface that should be fixed
for future callers.
Note that we do not end the iteration when a pack cannot be
opened, but we do return an error. That lets you complete
the iteration even in actively-repacked repository where an
.idx file may racily go away, but it also lets callers know
that they may not have gotten the complete list (which the
current reachability-check caller does care about).
We have to tweak one of the prune tests due to the changed
return value; an earlier test creates bogus .idx files and
does not clean them up. Having to make this tweak is a good
thing; it means we will not prune in a broken repository,
and the test confirms that we do not negatively impact a
more lenient caller, count-objects.
Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
The clean/smudge interface did not work well when filtering an
empty contents (failed and then passed the empty input through).
It can be argued that a filter that produces anything but empty for
an empty input is nonsense, but if the user wants to do strange
things, then why not?
* jh/filter-empty-contents:
sha1_file: pass empty buffer to index empty file
The configuration reader/writer uses mmap(2) interface to access
the files; when we find a directory, it barfed with "Out of memory?".
* jk/diagnose-config-mmap-failure:
xmmap(): drop "Out of memory?"
config.c: rewrite ENODEV into EISDIR when mmap fails
config.c: avoid xmmap error messages
config.c: fix mmap leak when writing config
read-cache.c: drop PROT_WRITE from mmap of index
Since 45e8a74 (has_sha1_file: re-check pack directory before
giving up, 2013-08-30), we spend extra effort for
has_sha1_file to give the right answer when somebody else is
repacking. Usually this effort does not matter, because
after finding that the object does not exist, the next step
is usually to die().
However, some code paths make a large number of
has_sha1_file checks which are _not_ expected to return 1.
The collision test in index-pack.c is such a case. On a
local system, this can cause a performance slowdown of
around 5%. But on a system with high-latency system calls
(like NFS), it can be much worse.
This patch introduces a "quick" flag to has_sha1_file which
callers can use when they would prefer high performance at
the cost of false negatives during repacks. There may be
other code paths that can use this, but the index-pack one
is the most obviously critical, so we'll start with
switching that one.
Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
The clean/smudge interface did not work well when filtering an
empty contents (failed and then passed the empty input through).
It can be argued that a filter that produces anything but empty for
an empty input is nonsense, but if the user wants to do strange
things, then why not?
* jh/filter-empty-contents:
sha1_file: pass empty buffer to index empty file
We show that message with die_errno(), but the OS is ought to know
why mmap(2) failed much better than we do. There is no reason for
us to say "Out of memory?" here.
Signed-off-by: Junio C Hamano <gitster@pobox.com>
The config-writing code uses xmmap to map the existing
config file, which will die if the map fails. This has two
downsides:
1. The error message is not very helpful, as it lacks any
context about the file we are mapping:
$ mkdir foo
$ git config --file=foo some.key value
fatal: Out of memory? mmap failed: No such device
2. We normally do not die in this code path; instead, we'd
rather report the error and return an appropriate exit
status (which is part of the public interface
documented in git-config.1).
This patch introduces a "gentle" form of xmmap which lets us
produce our own error message. We do not want to use mmap
directly, because we would like to use the other
compatibility elements of xmmap (e.g., handling 0-length
maps portably).
The end result is:
$ git.compile config --file=foo some.key value
error: unable to mmap 'foo': No such device
$ echo $?
3
Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
"hash-object --literally" introduced in v2.2 was not prepared to
take a really long object type name.
* jc/hash-object:
write_sha1_file(): do not use a separate sha1[] array
t1007: add hash-object --literally tests
hash-object --literally: fix buffer overrun with extra-long object type
git-hash-object.txt: document --literally option
Add the "--allow-unknown-type" option to "cat-file" to allow
inspecting loose objects of an experimental or a broken type.
* kn/cat-file-literally:
t1006: add tests for git cat-file --allow-unknown-type
cat-file: teach cat-file a '--allow-unknown-type' option
cat-file: make the options mutually exclusive
sha1_file: support reading from a loose object of unknown type
`git add` of an empty file with a filter pops complaints from
`copy_fd` about a bad file descriptor.
This traces back to these lines in sha1_file.c:index_core:
if (!size) {
ret = index_mem(sha1, NULL, size, type, path, flags);
The problem here is that content to be added to the index can be
supplied from an fd, or from a memory buffer, or from a pathname. This
call is supplying a NULL buffer pointer and a zero size.
Downstream logic takes the complete absence of a buffer to mean the
data is to be found elsewhere -- for instance, these, from convert.c:
if (params->src) {
write_err = (write_in_full(child_process.in, params->src, params->size) < 0);
} else {
write_err = copy_fd(params->fd, child_process.in);
}
~If there's a buffer, write from that, otherwise the data must be coming
from an open fd.~
Perfectly reasonable logic in a routine that's going to write from
either a buffer or an fd.
So change `index_core` to supply an empty buffer when indexing an empty
file.
There's a patch out there that instead changes the logic quoted above to
take a `-1` fd to mean "use the buffer", but it seems to me that the
distinction between a missing buffer and an empty one carries intrinsic
semantics, where the logic change is adapting the code to handle
incorrect arguments.
Signed-off-by: Jim Hill <gjthill@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
Access to objects in repositories that borrow from another one on a
slow NFS server unnecessarily got more expensive due to recent code
becoming more cautious in a naive way not to lose objects to pruning.
* jk/prune-mtime:
sha1_file: only freshen packs once per run
sha1_file: freshen pack objects before loose
reachable: only mark local objects as recent
"hash-object --literally" introduced in v2.2 was not prepared to
take a really long object type name.
* jc/hash-object:
write_sha1_file(): do not use a separate sha1[] array
t1007: add hash-object --literally tests
hash-object --literally: fix buffer overrun with extra-long object type
git-hash-object.txt: document --literally option
A replacement for contrib/workdir/git-new-workdir that does not
rely on symbolic links and make sharing of objects and refs safer
by making the borrowee and borrowers aware of each other.
* nd/multiple-work-trees: (41 commits)
prune --worktrees: fix expire vs worktree existence condition
t1501: fix test with split index
t2026: fix broken &&-chain
t2026 needs procondition SANITY
git-checkout.txt: a note about multiple checkout support for submodules
checkout: add --ignore-other-wortrees
checkout: pass whole struct to parse_branchname_arg instead of individual flags
git-common-dir: make "modules/" per-working-directory directory
checkout: do not fail if target is an empty directory
t2025: add a test to make sure grafts is working from a linked checkout
checkout: don't require a work tree when checking out into a new one
git_path(): keep "info/sparse-checkout" per work-tree
count-objects: report unused files in $GIT_DIR/worktrees/...
gc: support prune --worktrees
gc: factor out gc.pruneexpire parsing code
gc: style change -- no SP before closing parenthesis
checkout: clean up half-prepared directories in --to mode
checkout: reject if the branch is already checked out elsewhere
prune: strategies for linked checkouts
checkout: support checking out into a new working directory
...
Update sha1_loose_object_info() to optionally allow it to read
from a loose object file of unknown/bogus type; as the function
usually returns the type of the object it read in the form of enum
for known types, add an optional "typename" field to receive the
name of the type in textual form and a flag to indicate the reading
of a loose object file of unknown/bogus type.
Add parse_sha1_header_extended() which acts as a wrapper around
parse_sha1_header() allowing more information to be obtained.
Add unpack_sha1_header_to_strbuf() to unpack sha1 headers of
unknown/corrupt objects which have a unknown sha1 header size to
a strbuf structure. This was written by Junio C Hamano but tested
by me.
Helped-by: Junio C Hamano <gitster@pobox.com>
Helped-by: Eric Sunshine <sunshine@sunshineco.com>
Helped-by: Ramsay Jones <ramsay@ramsay1.demon.co.uk>
Hepled-by: Jeff King <peff@peff.net>
Signed-off-by: Karthik Nayak <karthik.188@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
Access to objects in repositories that borrow from another one on a
slow NFS server unnecessarily got more expensive due to recent code
becoming more cautious in a naive way not to lose objects to pruning.
* jk/prune-mtime:
sha1_file: only freshen packs once per run
sha1_file: freshen pack objects before loose
reachable: only mark local objects as recent
In the beginning, write_sha1_file() did not have a way to tell the
caller the name of the object it wrote to the caller. This was
changed in d6d3f9d0 (This implements the new "recursive tree"
write-tree., 2005-04-09) by adding the "returnsha1" parameter to the
function so that the callers who are interested in the value can
optionally pass a pointer to receive it.
It turns out that all callers do want to know the name of the object
it just has written. Nobody passes a NULL to this parameter, hence
it is not necessary to use a separate sha1[] array to receive the
result from write_sha1_file_prepare(), and copy the result to the
returnsha1 supplied by the caller.
Signed-off-by: Junio C Hamano <gitster@pobox.com>
"hash-object" learned in 5ba9a93 (hash-object: add --literally
option, 2014-09-11) to allow crafting a corrupt/broken object of
unknown type.
When the user-provided type is particularly long, however, it can
overflow the relatively small stack-based character array handed to
write_sha1_file_prepare() by hash_sha1_file() and write_sha1_file(),
leading to stack corruption (and crash). Introduce a custom helper
to allow arbitrarily long typenames just for "hash-object --literally".
[jc: Eric's original used a strbuf in the more common codepaths, and
I rewrote it to avoid penalizing the non-literally code. Bugs are mine]
Signed-off-by: Eric Sunshine <sunshine@sunshineco.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
Since 33d4221 (write_sha1_file: freshen existing objects,
2014-10-15), we update the mtime of existing objects that we
would have written out (had they not existed). For the
common case in which many objects are packed, we may update
the mtime on a single packfile repeatedly. This can result
in a noticeable performance problem if calling utime() is
expensive (e.g., because your storage is on NFS).
We can fix this by keeping a per-pack flag that lets us
freshen only once per program invocation.
An alternative would be to keep the packed_git.mtime flag up
to date as we freshen, and freshen only once every N
seconds. In practice, it's not worth the complexity. We are
racing against prune expiration times here, which inherently
must be set to accomodate reasonable program running times
(because they really care about the time between an object
being written and it becoming referenced, and the latter is
typically the last step a program takes).
Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
When writing out an object file, we first check whether it
already exists and if so optimize out the write. Prior to
33d4221, we did this by calling has_sha1_file(), which will
check for packed objects followed by loose. Since that
commit, we check loose objects first.
For the common case of a repository whose objects are mostly
packed, this means we will make a lot of extra access()
system calls checking for loose objects. We should follow
the same packed-then-loose order that all of our other
lookups use.
Reported-by: Stefan Saasen <ssaasen@atlassian.com>
Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
When pruning and repacking a repository that has an
alternate object store configured, we may traverse a large
number of objects in the alternate. This serves no purpose,
and may be expensive to do. A longer explanation is below.
Commits d3038d2 and abcb865 taught prune and pack-objects
(respectively) to treat "recent" objects as tips for
reachability, so that we keep whole chunks of history. They
built on the object traversal in 660c889 (sha1_file: add
for_each iterators for loose and packed objects,
2014-10-15), which covers both local and alternate objects.
In both cases, covering alternate objects is unnecessary, as
both commands can only drop objects from the local
repository. In the case of prune, we traverse only the local
object directory. And in the case of repacking, while we may
or may not include local objects in our pack, we will never
reach into the alternate with "repack -d". The "-l" option
is only a question of whether we are migrating objects from
the alternate into our repository, or leaving them
untouched.
It is possible that we may drop an object that is depended
upon by another object in the alternate. For example,
imagine two repositories, A and B, with A pointing to B as
an alternate. Now imagine a commit that is in B which
references a tree that is only in A. Traversing from recent
objects in B might prevent A from dropping that tree. But
this case isn't worth covering. Repo B should take
responsibility for its own objects. It would never have had
the commit in the first place if it did not also have the
tree, and assuming it is using the same "keep recent chunks
of history" scheme, then it would itself keep the tree, as
well.
So checking the alternate objects is not worth doing, and
come with a significant performance impact. In both cases,
we skip any recent objects that have already been marked
SEEN (i.e., that we know are already reachable for prune, or
included in the pack for a repack). So there is a slight
waste of time in opening the alternate packs at all, only to
notice that we have already considered each object. But much
worse, the alternate repository may have a large number of
objects that are not reachable from the local repository at
all, and we end up adding them to the traversal.
We can fix this by considering only local unseen objects.
Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
