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1834 commits

Author SHA1 Message Date
Junio C Hamano
7a43ab6fb2 Merge branch 'sg/split-index-racefix'
The codepath to support the experimental split-index mode had
remaining "racily clean" issues fixed.

* sg/split-index-racefix:
  split-index: BUG() when cache entry refers to non-existing shared entry
  split-index: smudge and add racily clean cache entries to split index
  split-index: don't compare cached data of entries already marked for split index
  split-index: count the number of deleted entries
  t1700-split-index: date back files to avoid racy situations
  split-index: add tests to demonstrate the racy split index problem
  t1700-split-index: document why FSMONITOR is disabled in this test script
2018-10-26 14:22:10 +09:00
Junio C Hamano
4d87b38e6c Merge branch 'nd/status-refresh-progress'
"git status" learns to show progress bar when refreshing the index
takes a long time.

* nd/status-refresh-progress:
  status: show progress bar if refreshing the index takes too long
2018-10-19 13:34:03 +09:00
Junio C Hamano
11877b9ebe Merge branch 'nd/the-index'
Various codepaths in the core-ish part learn to work on an
arbitrary in-core index structure, not necessarily the default
instance "the_index".

* nd/the-index: (23 commits)
  revision.c: reduce implicit dependency the_repository
  revision.c: remove implicit dependency on the_index
  ws.c: remove implicit dependency on the_index
  tree-diff.c: remove implicit dependency on the_index
  submodule.c: remove implicit dependency on the_index
  line-range.c: remove implicit dependency on the_index
  userdiff.c: remove implicit dependency on the_index
  rerere.c: remove implicit dependency on the_index
  sha1-file.c: remove implicit dependency on the_index
  patch-ids.c: remove implicit dependency on the_index
  merge.c: remove implicit dependency on the_index
  merge-blobs.c: remove implicit dependency on the_index
  ll-merge.c: remove implicit dependency on the_index
  diff-lib.c: remove implicit dependency on the_index
  read-cache.c: remove implicit dependency on the_index
  diff.c: remove implicit dependency on the_index
  grep.c: remove implicit dependency on the_index
  diff.c: remove the_index dependency in textconv() functions
  blame.c: rename "repo" argument to "r"
  combine-diff.c: remove implicit dependency on the_index
  ...
2018-10-19 13:34:02 +09:00
SZEDER Gábor
5581a019ba split-index: smudge and add racily clean cache entries to split index
Ever since the split index feature was introduced [1], refreshing a
split index is prone to a variant of the classic racy git problem.

Consider the following sequence of commands updating the split index
when the shared index contains a racily clean cache entry, i.e. an
entry whose cached stat data matches with the corresponding file in
the worktree and the cached mtime matches that of the index:

  echo "cached content" >file
  git update-index --split-index --add file
  echo "dirty worktree" >file    # size stays the same!
  # ... wait ...
  git update-index --add other-file

Normally, when a non-split index is updated, then do_write_index()
(the function responsible for writing all kinds of indexes, "regular",
split, and shared) recognizes racily clean cache entries, and writes
them with smudged stat data, i.e. with file size set to 0.  When
subsequent git commands read the index, they will notice that the
smudged stat data doesn't match with the file in the worktree, and
then go on to check the file's content and notice its dirtiness.

In the above example, however, in the second 'git update-index'
prepare_to_write_split_index() decides which cache entries stored only
in the shared index should be replaced in the new split index.  Alas,
this function never looks out for racily clean cache entries, and
since the file's stat data in the worktree hasn't changed since the
shared index was written, it won't be replaced in the new split index.
Consequently, do_write_index() doesn't even get this racily clean
cache entry, and can't smudge its stat data.  Subsequent git commands
will then see that the index has more recent mtime than the file and
that the (not smudged) cached stat data still matches with the file in
the worktree, and, ultimately, will erroneously consider the file
clean.

Modify prepare_to_write_split_index() to recognize racily clean cache
entries, and mark them to be added to the split index.  Note that
there are two places where it should check raciness: first those cache
entries that are only stored in the shared index, and then those that
have been copied by unpack_trees() from the shared index while it
constructed a new index.  This way do_write_index() will get these
racily clean cache entries as well, and will then write them with
smudged stat data to the new split index.

This change makes all tests in 't1701-racy-split-index.sh' pass, so
flip the two 'test_expect_failure' tests to success.  Also add the '#'
(as in nr. of trial) to those tests' description that were omitted
when the tests expected failure.

Note that after this change if the index is split when it contains a
racily clean cache entry, then a smudged cache entry will be written
both to the new shared and to the new split indexes.  This doesn't
affect regular git commands: as far as they are concerned this is just
an entry in the split index replacing an outdated entry in the shared
index.  It did affect a few tests in 't1700-split-index.sh', though,
because they actually check which entries are stored in the split
index; a previous patch in this series has already made the necessary
adjustments in 't1700'.  And racily clean cache entries and index
splitting are rare enough to not worry about the resulting duplicated
smudged cache entries, and the additional complexity required to
prevent them is not worth it.

Several tests failed occasionally when the test suite was run with
'GIT_TEST_SPLIT_INDEX=yes'.  Here are those that I managed to trace
back to this racy split index problem, starting with those failing
more frequently, with a link to a failing Travis CI build job for
each.  The highlighted line [2] shows when the racy file was written,
which is not always in the failing test but in a preceeding setup
test.

  t3903-stash.sh:
    https://travis-ci.org/git/git/jobs/385542084#L5858

  t4024-diff-optimize-common.sh:
    https://travis-ci.org/git/git/jobs/386531969#L3174

  t4015-diff-whitespace.sh:
    https://travis-ci.org/git/git/jobs/360797600#L8215

  t2200-add-update.sh:
    https://travis-ci.org/git/git/jobs/382543426#L3051

  t0090-cache-tree.sh:
    https://travis-ci.org/git/git/jobs/416583010#L3679

There might be others, e.g. perhaps 't1000-read-tree-m-3way.sh' and
others using 'lib-read-tree-m-3way.sh', but I couldn't confirm yet.

[1] In the branch leading to the merge commit v2.1.0-rc0~45 (Merge
    branch 'nd/split-index', 2014-07-16).

[2] Note that those highlighted lines are in the 'after failure' fold,
    and your browser might unhelpfully fold it up before you could
    take a good look.

Signed-off-by: SZEDER Gábor <szeder.dev@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-10-12 07:23:29 +09:00
Nguyễn Thái Ngọc Duy
26d024ecf0 ws.c: remove implicit dependency on the_index
Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-09-21 09:51:18 -07:00
Nguyễn Thái Ngọc Duy
58bf2a4cc7 sha1-file.c: remove implicit dependency on the_index
Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-09-21 09:48:11 -07:00
Nguyễn Thái Ngọc Duy
7e196c3a28 merge.c: remove implicit dependency on the_index
Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-09-21 09:48:10 -07:00
Nguyễn Thái Ngọc Duy
92a1bf5a58 read-cache.c: remove 'const' from index_has_changes()
This function calls do_diff_cache() which eventually needs to set this
"istate" to unpack_options->src_index [1]. This is an unfortunate fact
that unpack_trees() _will_ update [2] src_index so we can't really pass a
const index_state there. Just remove 'const'.

[1] Right now diff_cache() in diff-lib.c assigns the_index to
    src_index. But the plan is to get rid of the_index, so it should
    be 'istate' from here that gets assigned to src_index.

[2] Some transient bits in the source index are touched. Optional
    extensions can also be removed. But other than that the source
    tree should still be valid.

Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-09-21 09:48:10 -07:00
Junio C Hamano
769af0fd9e Merge branch 'jk/cocci'
spatch transformation to replace boolean uses of !hashcmp() to
newly introduced oideq() is added, and applied, to regain
performance lost due to support of multiple hash algorithms.

* jk/cocci:
  show_dirstat: simplify same-content check
  read-cache: use oideq() in ce_compare functions
  convert hashmap comparison functions to oideq()
  convert "hashcmp() != 0" to "!hasheq()"
  convert "oidcmp() != 0" to "!oideq()"
  convert "hashcmp() == 0" to hasheq()
  convert "oidcmp() == 0" to oideq()
  introduce hasheq() and oideq()
  coccinelle: use <...> for function exclusion
2018-09-17 13:53:57 -07:00
Junio C Hamano
c2407322b6 Merge branch 'nd/clone-case-smashing-warning'
Running "git clone" against a project that contain two files with
pathnames that differ only in cases on a case insensitive
filesystem would result in one of the files lost because the
underlying filesystem is incapable of holding both at the same
time.  An attempt is made to detect such a case and warn.

* nd/clone-case-smashing-warning:
  clone: report duplicate entries on case-insensitive filesystems
2018-09-17 13:53:47 -07:00
Nguyễn Thái Ngọc Duy
ae9af12287 status: show progress bar if refreshing the index takes too long
Refreshing the index is usually very fast, but it can still take a
long time sometimes. Cold cache is one. Or copying a repo to a new
place (*). It's good to show something to let the user know "git
status" is not hanging, it's just busy doing something.

(*) In this case, all stat info in the index becomes invalid and git
    falls back to rehashing all file content to see if there's any
    difference between updating stat info in the index. This is quite
    expensive. Even with a repo as small as git.git, it takes 3
    seconds.

Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-09-17 09:38:50 -07:00
Jeff King
e3ff0683e2 convert "hashcmp() == 0" to hasheq()
This is the partner patch to the previous one, but covering
the "hash" variants instead of "oid".  Note that our
coccinelle rule is slightly more complex to avoid triggering
the call in hasheq().

I didn't bother to add a new rule to convert:

  - hasheq(E1->hash, E2->hash)
  + oideq(E1, E2)

Since these are new functions, there won't be any such
existing callers. And since most of the code is already
using oideq, we're not likely to introduce new ones.

We might still see "!hashcmp(E1->hash, E2->hash)" from topics
in flight. But because our new rule comes after the existing
ones, that should first get converted to "!oidcmp(E1, E2)"
and then to "oideq(E1, E2)".

Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-08-29 11:32:49 -07:00
Jeff King
4a7e27e957 convert "oidcmp() == 0" to oideq()
Using the more restrictive oideq() should, in the long run,
give the compiler more opportunities to optimize these
callsites. For now, this conversion should be a complete
noop with respect to the generated code.

The result is also perhaps a little more readable, as it
avoids the "zero is equal" idiom. Since it's so prevalent in
C, I think seasoned programmers tend not to even notice it
anymore, but it can sometimes make for awkward double
negations (e.g., we can drop a few !!oidcmp() instances
here).

This patch was generated almost entirely by the included
coccinelle patch. This mechanical conversion should be
completely safe, because we check explicitly for cases where
oidcmp() is compared to 0, which is what oideq() is doing
under the hood. Note that we don't have to catch "!oidcmp()"
separately; coccinelle's standard isomorphisms make sure the
two are treated equivalently.

I say "almost" because I did hand-edit the coccinelle output
to fix up a few style violations (it mostly keeps the
original formatting, but sometimes unwraps long lines).

Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-08-29 11:32:49 -07:00
Jeff King
14438c4497 introduce hasheq() and oideq()
The main comparison functions we provide for comparing
object ids are hashcmp() and oidcmp(). These are more
flexible than a strict equality check, since they also
express ordering. That makes them useful for sorting and
binary searching. However, it also makes them potentially
slower than a strict equality check. Consider this C code,
which is traditionally what our hashcmp has looked like:

  #include <string.h>
  int hashcmp(const unsigned char *a, const unsigned char *b)
  {
          return memcmp(a, b, 20);
  }

Compiling with "gcc -O2 -S -fverbose-asm", the generated
assembly shows that we actually call memcmp(). But if we
change this to a strict equality check:

          return !memcmp(a, b, 20);

we get a faster inline version:

          movq    (%rdi), %rax    # MEM[(void *)a_4(D)], MEM[(void *)a_4(D)]
          movq    8(%rdi), %rdx   # MEM[(void *)a_4(D)], tmp101
          xorq    (%rsi), %rax    # MEM[(void *)b_5(D)], tmp94
          xorq    8(%rsi), %rdx   # MEM[(void *)b_5(D)], tmp93
          orq     %rax, %rdx      # tmp94, tmp93
          jne     .L2     #,
          movl    16(%rsi), %eax  # MEM[(void *)b_5(D)], tmp104
          cmpl    %eax, 16(%rdi)  # tmp104, MEM[(void *)a_4(D)]
          je      .L5     #,

Obviously our hashcmp() doesn't include the "!". But because
it's an inline function, optimizing compilers are able to
see "!hashcmp(a,b)" in calling code and take advantage of
this case. So there has been no value thus far in
introducing a more restricted interface for doing strict
equality checks.

But as Git learns about more values for the_hash_algo, our
hashcmp() will grow more complicated and may even delegate
at runtime to functions optimized specifically for that hash
size. That breaks the inline connection we have, and the
compiler will have to assume that the caller really cares
about the sign and magnitude of the memcmp() result, even
though the vast majority don't.

We can solve that by introducing a hasheq() function (and
matching oideq() wrapper), which callers can use to make it
clear that they only care about equality. For now, the
implementation will literally be "!hashcmp()", but it frees
us up later to introduce code optimized specifically for the
equality check.

Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-08-29 11:32:49 -07:00
Jeff King
183a638b7d hashcmp: assert constant hash size
Prior to 509f6f62a4 (cache: update object ID functions for
the_hash_algo, 2018-07-16), hashcmp() called memcmp() with a
constant size of 20 bytes. Some compilers were able to turn
that into a few quad-word comparisons, which is faster than
actually calling memcmp().

In 509f6f62a4, we started using the_hash_algo->rawsz
instead. Even though this will always be 20, the compiler
doesn't know that while inlining hashcmp() and ends up just
generating a call to memcmp().

Eventually we'll have to deal with multiple hash sizes, but
for the upcoming v2.19, we can restore some of the original
performance by asserting on the size. That gives the
compiler enough information to know that the memcmp will
always be called with a length of 20, and it performs the
same optimization.

Here are numbers for p0001.2 run against linux.git on a few
versions. This is using -O2 with gcc 8.2.0.

  Test     v2.18.0             v2.19.0-rc0               HEAD
  ------------------------------------------------------------------------------
  0001.2:  34.24(33.81+0.43)   34.83(34.42+0.40) +1.7%   33.90(33.47+0.42) -1.0%

You can see that v2.19 is a little slower than v2.18. This
commit ended up slightly faster than v2.18, but there's a
fair bit of run-to-run noise (the generated code in the two
cases is basically the same). This patch does seem to be
consistently 1-2% faster than v2.19.

I tried changing hashcpy(), which was also touched by
509f6f62a4, in the same way, but couldn't measure any
speedup. Which makes sense, at least for this workload. A
traversal of the whole commit graph requires looking up
every entry of every tree via lookup_object(). That's many
multiples of the numbers of objects in the repository (most
of the lookups just return "yes, we already saw that
object").

[jn: verified using "make object.s" that the memcmp call goes away.]

Reported-by: Derrick Stolee <stolee@gmail.com>
Signed-off-by: Jeff King <peff@peff.net
Reviewed-by: Jonathan Nieder <jrnieder@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-08-23 06:20:58 -07:00
Junio C Hamano
5ade034464 Merge branch 'en/incl-forward-decl'
Code hygiene improvement for the header files.

* en/incl-forward-decl:
  Remove forward declaration of an enum
  compat/precompose_utf8.h: use more common include guard style
  urlmatch.h: fix include guard
  Move definition of enum branch_track from cache.h to branch.h
  alloc: make allocate_alloc_state and clear_alloc_state more consistent
  Add missing includes and forward declarations
2018-08-20 12:41:32 -07:00
Junio C Hamano
0c54cdaf65 Merge branch 'jk/for-each-object-iteration'
The API to iterate over all objects learned to optionally list
objects in the order they appear in packfiles, which helps locality
of access if the caller accesses these objects while as objects are
enumerated.

* jk/for-each-object-iteration:
  for_each_*_object: move declarations to object-store.h
  cat-file: use a single strbuf for all output
  cat-file: split batch "buf" into two variables
  cat-file: use oidset check-and-insert
  cat-file: support "unordered" output for --batch-all-objects
  cat-file: rename batch_{loose,packed}_object callbacks
  t1006: test cat-file --batch-all-objects with duplicates
  for_each_packed_object: support iterating in pack-order
  for_each_*_object: give more comprehensive docstrings
  for_each_*_object: take flag arguments as enum
  for_each_*_object: store flag definitions in a single location
2018-08-20 11:33:52 -07:00
Duy Nguyen
b878579ae7 clone: report duplicate entries on case-insensitive filesystems
Paths that only differ in case work fine in a case-sensitive
filesystems, but if those repos are cloned in a case-insensitive one,
you'll get problems. The first thing to notice is "git status" will
never be clean with no indication what exactly is "dirty".

This patch helps the situation a bit by pointing out the problem at
clone time. Even though this patch talks about case sensitivity, the
patch makes no assumption about folding rules by the filesystem. It
simply observes that if an entry has been already checked out at clone
time when we're about to write a new path, some folding rules are
behind this.

In the case that we can't rely on filesystem (via inode number) to do
this check, fall back to fspathcmp() which is not perfect but should
not give false positives.

This patch is tested with vim-colorschemes and Sublime-Gitignore
repositories on a JFS partition with case insensitive support on
Linux.

Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-08-17 12:10:37 -07:00
Junio C Hamano
30cf1911e2 Merge branch 'js/vscode'
Add a script (in contrib/) to help users of VSCode work better with
our codebase.

* js/vscode:
  vscode: let cSpell work on commit messages, too
  vscode: add a dictionary for cSpell
  vscode: use 8-space tabs, no trailing ws, etc for Git's source code
  vscode: wrap commit messages at column 72 by default
  vscode: only overwrite C/C++ settings
  mingw: define WIN32 explicitly
  cache.h: extract enum declaration from inside a struct declaration
  vscode: hard-code a couple defines
  contrib: add a script to initialize VS Code configuration
2018-08-15 15:08:26 -07:00
Junio C Hamano
1689c22c1c Merge branch 'jk/core-use-replace-refs'
A new configuration variable core.usereplacerefs has been added,
primarily to help server installations that want to ignore the
replace mechanism altogether.

* jk/core-use-replace-refs:
  add core.usereplacerefs config option
  check_replace_refs: rename to read_replace_refs
  check_replace_refs: fix outdated comment
2018-08-15 15:08:23 -07:00
Elijah Newren
e730b81df6 Move definition of enum branch_track from cache.h to branch.h
'branch_track' feels more closely related to branching, and it is
needed later in branch.h; rather than #include'ing cache.h in branch.h
for this small enum, just move the enum and the external declaration
for git_branch_track to branch.h.

Reviewed-by: Jonathan Nieder <jrnieder@gmail.com>
Signed-off-by: Elijah Newren <newren@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-08-15 11:52:09 -07:00
Jeff King
0889aae1cd for_each_*_object: move declarations to object-store.h
The for_each_loose_object() and for_each_packed_object()
functions are meant to be part of a unified interface: they
use the same set of for_each_object_flags, and it's not
inconceivable that we might one day add a single
for_each_object() wrapper around them.

Let's put them together in a single file, so we can avoid
awkwardness like saying "the flags for this function are
over in cache.h". Moving the loose functions to packfile.h
is silly. Moving the packed functions to cache.h works, but
makes the "cache.h is a kitchen sink" problem worse. The
best place is the recently-created object-store.h, since
these are quite obviously related to object storage.

The for_each_*_in_objdir() functions do not use the same
flags, but they are logically part of the same interface as
for_each_loose_object(), and share callback signatures. So
we'll move those, as well, as they also make sense in
object-store.h.

Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-08-14 12:29:57 -07:00
Jeff King
736eb88fdc for_each_packed_object: support iterating in pack-order
We currently iterate over objects within a pack in .idx
order, which uses the object hashes. That means that it
is effectively random with respect to the location of the
object within the pack. If you're going to access the actual
object data, there are two reasons to move linearly through
the pack itself:

  1. It improves the locality of access in the packfile. In
     the cold-cache case, this may mean fewer disk seeks, or
     better usage of disk cache.

  2. We store related deltas together in the packfile. Which
     means that the delta base cache can operate much more
     efficiently if we visit all of those related deltas in
     sequence, as the earlier items are likely to still be
     in the cache.  Whereas if we visit the objects in
     random order, our cache entries are much more likely to
     have been evicted by unrelated deltas in the meantime.

So in general, if you're going to access the object contents
pack order is generally going to end up more efficient.

But if you're simply generating a list of object names, or
if you're going to end up sorting the result anyway, you're
better off just using the .idx order, as finding the pack
order means generating the in-memory pack-revindex.
According to the numbers in 8b8dfd5132 (pack-revindex:
radix-sort the revindex, 2013-07-11), that takes about 200ms
for linux.git, and 20ms for git.git (those numbers are a few
years old but are still a good ballpark).

That makes it a good optimization for some cases (we can
save tens of seconds in git.git by having good locality of
delta access, for a 20ms cost), but a bad one for others
(e.g., right now "cat-file --batch-all-objects
--batch-check="%(objectname)" is 170ms in git.git, so adding
20ms to that is noticeable).

Hence this patch makes it an optional flag. You can't
actually do any interesting timings yet, as it's not plumbed
through to any user-facing tools like cat-file. That will
come in a later patch.

Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-08-13 13:48:28 -07:00
Jeff King
8b36155190 for_each_*_object: give more comprehensive docstrings
We already mention the local/alternate behavior of these
functions, but we can help clarify a few other behaviors:

 - there's no need to mention LOCAL_ONLY specifically, since
   we already reference the flags by type (and as we add
   more flags, we don't want to have to mention each)

 - clarify that reachability doesn't matter here; this is
   all accessible objects

 - what ordering/uniqueness guarantees we give

 - how pack-specific flags are handled for the loose case

Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-08-13 13:48:26 -07:00
Jeff King
a7ff6f5a0f for_each_*_object: take flag arguments as enum
It's not wrong to pass our flags in an "unsigned", as we
know it will be at least as large as the enum.  However,
using the enum in the declaration makes it more obvious
where to find the list of flags.

While we're here, let's also drop the "extern" noise-words
from the declarations, per our modern coding style.

Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-08-13 13:48:25 -07:00
Jeff King
202e7f1e16 for_each_*_object: store flag definitions in a single location
These flags were split between cache.h and packfile.h,
because some of the flags apply only to packs. However, they
share a single numeric namespace, since both are respected
for the packed variant. Let's make sure they're defined
together so that nobody accidentally adds a new flag in one
location that duplicates the other.

While we're here, let's also put them in an enum (which
helps debugger visibility) and use "(1<<n)" rather than
counting powers of 2 manually.

Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-08-13 13:47:50 -07:00
Junio C Hamano
78a72ad4f8 Merge branch 'jt/commit-graph-per-object-store'
The singleton commit-graph in-core instance is made per in-core
repository instance.

* jt/commit-graph-per-object-store:
  commit-graph: add repo arg to graph readers
  commit-graph: store graph in struct object_store
  commit-graph: add free_commit_graph
  commit-graph: add missing forward declaration
  object-store: add missing include
  commit-graph: refactor preparing commit graph
2018-08-02 15:30:47 -07:00
Junio C Hamano
c18ac30e9e Merge branch 'en/dirty-merge-fixes'
The recursive merge strategy did not properly ensure there was no
change between HEAD and the index before performing its operation,
which has been corrected.

* en/dirty-merge-fixes:
  merge: fix misleading pre-merge check documentation
  merge-recursive: enforce rule that index matches head before merging
  t6044: add more testcases with staged changes before a merge is invoked
  merge-recursive: fix assumption that head tree being merged is HEAD
  merge-recursive: make sure when we say we abort that we actually abort
  t6044: add a testcase for index matching head, when head doesn't match HEAD
  t6044: verify that merges expected to abort actually abort
  index_has_changes(): avoid assuming operating on the_index
  read-cache.c: move index_has_changes() from merge.c
2018-08-02 15:30:45 -07:00
Junio C Hamano
ae533c4a92 Merge branch 'jm/cache-entry-from-mem-pool'
For a large tree, the index needs to hold many cache entries
allocated on heap.  These cache entries are now allocated out of a
dedicated memory pool to amortize malloc(3) overhead.

* jm/cache-entry-from-mem-pool:
  block alloc: add validations around cache_entry lifecyle
  block alloc: allocate cache entries from mem_pool
  mem-pool: fill out functionality
  mem-pool: add life cycle management functions
  mem-pool: only search head block for available space
  block alloc: add lifecycle APIs for cache_entry structs
  read-cache: teach make_cache_entry to take object_id
  read-cache: teach refresh_cache_entry to take istate
2018-08-02 15:30:43 -07:00
Junio C Hamano
37aac3e408 Merge branch 'bc/object-id'
Conversion from uchar[40] to struct object_id continues.

* bc/object-id:
  pretty: switch hard-coded constants to the_hash_algo
  sha1-file: convert constants to uses of the_hash_algo
  log-tree: switch GIT_SHA1_HEXSZ to the_hash_algo->hexsz
  diff: switch GIT_SHA1_HEXSZ to use the_hash_algo
  builtin/merge-recursive: make hash independent
  builtin/merge: switch to use the_hash_algo
  builtin/fmt-merge-msg: make hash independent
  builtin/update-index: simplify parsing of cacheinfo
  builtin/update-index: convert to using the_hash_algo
  refs/files-backend: use the_hash_algo for writing refs
  sha1-name: use the_hash_algo when parsing object names
  strbuf: allocate space with GIT_MAX_HEXSZ
  commit: express tree entry constants in terms of the_hash_algo
  hex: switch to using the_hash_algo
  tree-walk: replace hard-coded constants with the_hash_algo
  cache: update object ID functions for the_hash_algo
2018-08-02 15:30:39 -07:00
Johannes Schindelin
58930fdb19 cache.h: extract enum declaration from inside a struct declaration
While it is technically possible, it is confusing. Not only the user,
but also VS Code's intellisense.

Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-07-30 13:14:38 -07:00
Jeff King
6ebd1cafe2 check_replace_refs: rename to read_replace_refs
This was added as a NEEDSWORK in c3c36d7de2 (replace-object:
check_replace_refs is safe in multi repo environment, 2018-04-11),
waiting for a calmer period. Since doing so now doesn't conflict
with anything in 'pu', it seems as good a time as any.

Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-07-18 15:45:14 -07:00
Jeff King
72470aa38a check_replace_refs: fix outdated comment
Commit afc711b8e1 (rename read_replace_refs to
check_replace_refs, 2014-02-18) added a comment mentioning
that check_replace_refs is set in two ways:

  - from user intent via --no-replace-objects, etc

  - after seeing there are no replace refs to respect

Since c3c36d7de2 (replace-object: check_replace_refs is safe
in multi repo environment, 2018-04-11) the second is no
longer true. Let's drop that part of the comment.

Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-07-18 15:45:06 -07:00
Junio C Hamano
00624d608c Merge branch 'sb/object-store-grafts'
The conversion to pass "the_repository" and then "a_repository"
throughout the object access API continues.

* sb/object-store-grafts:
  commit: allow lookup_commit_graft to handle arbitrary repositories
  commit: allow prepare_commit_graft to handle arbitrary repositories
  shallow: migrate shallow information into the object parser
  path.c: migrate global git_path_* to take a repository argument
  cache: convert get_graft_file to handle arbitrary repositories
  commit: convert read_graft_file to handle arbitrary repositories
  commit: convert register_commit_graft to handle arbitrary repositories
  commit: convert commit_graft_pos() to handle arbitrary repositories
  shallow: add repository argument to is_repository_shallow
  shallow: add repository argument to check_shallow_file_for_update
  shallow: add repository argument to register_shallow
  shallow: add repository argument to set_alternate_shallow_file
  commit: add repository argument to lookup_commit_graft
  commit: add repository argument to prepare_commit_graft
  commit: add repository argument to read_graft_file
  commit: add repository argument to register_commit_graft
  commit: add repository argument to commit_graft_pos
  object: move grafts to object parser
  object-store: move object access functions to object-store.h
2018-07-18 12:20:28 -07:00
Jonathan Tan
dade47c06c commit-graph: add repo arg to graph readers
Add a struct repository argument to the functions in commit-graph.h that
read the commit graph. (This commit does not affect functions that write
commit graphs.)

Because the commit graph functions can now read the commit graph of any
repository, the global variable core_commit_graph has been removed.
Instead, the config option core.commitGraph is now read on the first
time in a repository that a commit is attempted to be parsed using its
commit graph.

This commit includes a test that exercises the functionality on an
arbitrary repository that is not the_repository.

Signed-off-by: Jonathan Tan <jonathantanmy@google.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-07-17 15:47:48 -07:00
brian m. carlson
509f6f62a4 cache: update object ID functions for the_hash_algo
Most of our code has been converted to use struct object_id for object
IDs.  However, there are some places that still have not, and there are
a variety of places that compare equivalently sized hashes that are not
object IDs.  All of these hashes are artifacts of the internal hash
algorithm in use, and when we switch to NewHash for object storage, all
of these uses will also switch.

Update the hashcpy, hashclr, and hashcmp functions to use the_hash_algo,
since they are used in a variety of places to copy and manipulate
buffers that need to move data into or out of struct object_id.  This
has the effect of making the corresponding oid* functions use
the_hash_algo as well.

Signed-off-by: brian m. carlson <sandals@crustytoothpaste.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-07-16 14:27:38 -07:00
Elijah Newren
e1f8694f33 merge-recursive: fix assumption that head tree being merged is HEAD
`git merge-recursive` does a three-way merge between user-specified trees
base, head, and remote.  Since the user is allowed to specify head, we can
not necesarily assume that head == HEAD.

Modify index_has_changes() to take an extra argument specifying the tree
to compare against.  If NULL, it will compare to HEAD.  We then use this
from merge-recursive to make sure we compare to the user-specified head.

Signed-off-by: Elijah Newren <newren@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-07-11 09:38:36 -07:00
Elijah Newren
1b9fbefbe0 index_has_changes(): avoid assuming operating on the_index
Modify index_has_changes() to take a struct istate* instead of just
operating on the_index.  This is only a partial conversion, though,
because we call do_diff_cache() which implicitly assumes work is to be
done on the_index.  Ongoing work is being done elsewhere to do the
remainder of the conversion, and thus is not duplicated here.  Instead,
a simple check is put in place until that work is complete.

Signed-off-by: Elijah Newren <newren@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-07-03 13:13:18 -07:00
Jameson Miller
8616a2d0cb block alloc: add validations around cache_entry lifecyle
Add an option (controlled by an environment variable) perform extra
validations on mem_pool allocated cache entries. When set:

  1) Invalidate cache_entry memory when discarding cache_entry.

  2) When discarding index_state struct, verify that all cache_entries
     were allocated from expected mem_pool.

  3) When discarding mem_pools, invalidate mem_pool memory.

This should provide extra checks that mem_pools and their allocated
cache_entries are being used as expected.

Signed-off-by: Jameson Miller <jamill@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-07-03 10:58:27 -07:00
Jameson Miller
8e72d67529 block alloc: allocate cache entries from mem_pool
When reading large indexes from disk, a portion of the time is
dominated in malloc() calls. This can be mitigated by allocating a
large block of memory and manage it ourselves via memory pools.

This change moves the cache entry allocation to be on top of memory
pools.

Design:

The index_state struct will gain a notion of an associated memory_pool
from which cache_entries will be allocated from. When reading in the
index from disk, we have information on the number of entries and
their size, which can guide us in deciding how large our initial
memory allocation should be. When an index is discarded, the
associated memory_pool will be discarded as well - so the lifetime of
a cache_entry is tied to the lifetime of the index_state that it was
allocated for.

In the case of a Split Index, the following rules are followed. 1st,
some terminology is defined:

Terminology:
  - 'the_index': represents the logical view of the index

  - 'split_index': represents the "base" cache entries. Read from the
    split index file.

'the_index' can reference a single split_index, as well as
cache_entries from the split_index. `the_index` will be discarded
before the `split_index` is.  This means that when we are allocating
cache_entries in the presence of a split index, we need to allocate
the entries from the `split_index`'s memory pool.  This allows us to
follow the pattern that `the_index` can reference cache_entries from
the `split_index`, and that the cache_entries will not be freed while
they are still being referenced.

Managing transient cache_entry structs:
Cache entries are usually allocated for an index, but this is not always
the case. Cache entries are sometimes allocated because this is the
type that the existing checkout_entry function works with. Because of
this, the existing code needs to handle cache entries associated with an
index / memory pool, and those that only exist transiently. Several
strategies were contemplated around how to handle this:

Chosen approach:
An extra field was added to the cache_entry type to track whether the
cache_entry was allocated from a memory pool or not. This is currently
an int field, as there are no more available bits in the existing
ce_flags bit field. If / when more bits are needed, this new field can
be turned into a proper bit field.

Alternatives:

1) Do not include any information about how the cache_entry was
allocated. Calling code would be responsible for tracking whether the
cache_entry needed to be freed or not.
  Pro: No extra memory overhead to track this state
  Con: Extra complexity in callers to handle this correctly.

The extra complexity and burden to not regress this behavior in the
future was more than we wanted.

2) cache_entry would gain knowledge about which mem_pool allocated it
  Pro: Could (potentially) do extra logic to know when a mem_pool no
       longer had references to any cache_entry
  Con: cache_entry would grow heavier by a pointer, instead of int

We didn't see a tangible benefit to this approach

3) Do not add any extra information to a cache_entry, but when freeing a
   cache entry, check if the memory exists in a region managed by existing
   mem_pools.
  Pro: No extra memory overhead to track state
  Con: Extra computation is performed when freeing cache entries

We decided tracking and iterating over known memory pool regions was
less desirable than adding an extra field to track this stae.

Signed-off-by: Jameson Miller <jamill@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-07-03 10:58:27 -07:00
Jameson Miller
a849735bfb block alloc: add lifecycle APIs for cache_entry structs
It has been observed that the time spent loading an index with a large
number of entries is partly dominated by malloc() calls. This change
is in preparation for using memory pools to reduce the number of
malloc() calls made to allocate cahce entries when loading an index.

Add an API to allocate and discard cache entries, abstracting the
details of managing the memory backing the cache entries. This commit
does actually change how memory is managed - this will be done in a
later commit in the series.

This change makes the distinction between cache entries that are
associated with an index and cache entries that are not associated with
an index. A main use of cache entries is with an index, and we can
optimize the memory management around this. We still have other cases
where a cache entry is not persisted with an index, and so we need to
handle the "transient" use case as well.

To keep the congnitive overhead of managing the cache entries, there
will only be a single discard function. This means there must be enough
information kept with the cache entry so that we know how to discard
them.

A summary of the main functions in the API is:

make_cache_entry: create cache entry for use in an index. Uses specified
                  parameters to populate cache_entry fields.

make_empty_cache_entry: Create an empty cache entry for use in an index.
                        Returns cache entry with empty fields.

make_transient_cache_entry: create cache entry that is not used in an
                            index. Uses specified parameters to populate
                            cache_entry fields.

make_empty_transient_cache_entry: create cache entry that is not used in
                                  an index. Returns cache entry with
                                  empty fields.

discard_cache_entry: A single function that knows how to discard a cache
                     entry regardless of how it was allocated.

Signed-off-by: Jameson Miller <jamill@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-07-03 10:58:27 -07:00
Jameson Miller
825ed4d9a0 read-cache: teach make_cache_entry to take object_id
Teach make_cache_entry function to take object_id instead of a SHA-1.

Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-07-03 10:58:15 -07:00
Jameson Miller
768d796506 read-cache: teach refresh_cache_entry to take istate
Refactor refresh_cache_entry() to work on a specific index, instead of
implicitly using the_index. This is in preparation for making the
make_cache_entry function apply to a specific index.

Signed-off-by: Jameson Miller <jamill@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2018-07-03 10:58:15 -07:00
Junio C Hamano
b16b60f71b Merge branch 'sb/object-store-grafts' into sb/object-store-lookup
* sb/object-store-grafts:
  commit: allow lookup_commit_graft to handle arbitrary repositories
  commit: allow prepare_commit_graft to handle arbitrary repositories
  shallow: migrate shallow information into the object parser
  path.c: migrate global git_path_* to take a repository argument
  cache: convert get_graft_file to handle arbitrary repositories
  commit: convert read_graft_file to handle arbitrary repositories
  commit: convert register_commit_graft to handle arbitrary repositories
  commit: convert commit_graft_pos() to handle arbitrary repositories
  shallow: add repository argument to is_repository_shallow
  shallow: add repository argument to check_shallow_file_for_update
  shallow: add repository argument to register_shallow
  shallow: add repository argument to set_alternate_shallow_file
  commit: add repository argument to lookup_commit_graft
  commit: add repository argument to prepare_commit_graft
  commit: add repository argument to read_graft_file
  commit: add repository argument to register_commit_graft
  commit: add repository argument to commit_graft_pos
  object: move grafts to object parser
  object-store: move object access functions to object-store.h
2018-06-29 10:43:28 -07:00
Junio C Hamano
110240588d Merge branch 'sb/object-store-alloc'
The conversion to pass "the_repository" and then "a_repository"
throughout the object access API continues.

* sb/object-store-alloc:
  alloc: allow arbitrary repositories for alloc functions
  object: allow create_object to handle arbitrary repositories
  object: allow grow_object_hash to handle arbitrary repositories
  alloc: add repository argument to alloc_commit_index
  alloc: add repository argument to alloc_report
  alloc: add repository argument to alloc_object_node
  alloc: add repository argument to alloc_tag_node
  alloc: add repository argument to alloc_commit_node
  alloc: add repository argument to alloc_tree_node
  alloc: add repository argument to alloc_blob_node
  object: add repository argument to grow_object_hash
  object: add repository argument to create_object
  repository: introduce parsed objects field
2018-06-25 13:22:38 -07:00
Junio C Hamano
2289880f78 Merge branch 'nd/command-list'
The list of commands with their various attributes were spread
across a few places in the build procedure, but it now is getting a
bit more consolidated to allow more automation.

* nd/command-list:
  completion: allow to customize the completable command list
  completion: add and use --list-cmds=alias
  completion: add and use --list-cmds=nohelpers
  Move declaration for alias.c to alias.h
  completion: reduce completable command list
  completion: let git provide the completable command list
  command-list.txt: documentation and guide line
  help: use command-list.txt for the source of guides
  help: add "-a --verbose" to list all commands with synopsis
  git: support --list-cmds=list-<category>
  completion: implement and use --list-cmds=main,others
  git --list-cmds: collect command list in a string_list
  git.c: convert --list-* to --list-cmds=*
  Remove common-cmds.h
  help: use command-list.h for common command list
  generate-cmds.sh: export all commands to command-list.h
  generate-cmds.sh: factor out synopsis extract code
2018-06-01 15:06:37 +09:00
Junio C Hamano
42c8ce1c49 Merge branch 'bc/object-id'
Conversion from uchar[20] to struct object_id continues.

* bc/object-id: (42 commits)
  merge-one-file: compute empty blob object ID
  add--interactive: compute the empty tree value
  Update shell scripts to compute empty tree object ID
  sha1_file: only expose empty object constants through git_hash_algo
  dir: use the_hash_algo for empty blob object ID
  sequencer: use the_hash_algo for empty tree object ID
  cache-tree: use is_empty_tree_oid
  sha1_file: convert cached object code to struct object_id
  builtin/reset: convert use of EMPTY_TREE_SHA1_BIN
  builtin/receive-pack: convert one use of EMPTY_TREE_SHA1_HEX
  wt-status: convert two uses of EMPTY_TREE_SHA1_HEX
  submodule: convert several uses of EMPTY_TREE_SHA1_HEX
  sequencer: convert one use of EMPTY_TREE_SHA1_HEX
  merge: convert empty tree constant to the_hash_algo
  builtin/merge: switch tree functions to use object_id
  builtin/am: convert uses of EMPTY_TREE_SHA1_BIN to the_hash_algo
  sha1-file: add functions for hex empty tree and blob OIDs
  builtin/receive-pack: avoid hard-coded constants for push certs
  diff: specify abbreviation size in terms of the_hash_algo
  upload-pack: replace use of several hard-coded constants
  ...
2018-05-30 14:04:10 +09:00
Junio C Hamano
7913f53b56 Sync with Git 2.17.1
* maint: (25 commits)
  Git 2.17.1
  Git 2.16.4
  Git 2.15.2
  Git 2.14.4
  Git 2.13.7
  fsck: complain when .gitmodules is a symlink
  index-pack: check .gitmodules files with --strict
  unpack-objects: call fsck_finish() after fscking objects
  fsck: call fsck_finish() after fscking objects
  fsck: check .gitmodules content
  fsck: handle promisor objects in .gitmodules check
  fsck: detect gitmodules files
  fsck: actually fsck blob data
  fsck: simplify ".git" check
  index-pack: make fsck error message more specific
  verify_path: disallow symlinks in .gitmodules
  update-index: stat updated files earlier
  verify_dotfile: mention case-insensitivity in comment
  verify_path: drop clever fallthrough
  skip_prefix: add case-insensitive variant
  ...
2018-05-29 17:10:05 +09:00
Junio C Hamano
ad635e82d6 Merge branch 'nd/pack-objects-pack-struct'
"git pack-objects" needs to allocate tons of "struct object_entry"
while doing its work, and shrinking its size helps the performance
quite a bit.

* nd/pack-objects-pack-struct:
  ci: exercise the whole test suite with uncommon code in pack-objects
  pack-objects: reorder members to shrink struct object_entry
  pack-objects: shrink delta_size field in struct object_entry
  pack-objects: shrink size field in struct object_entry
  pack-objects: clarify the use of object_entry::size
  pack-objects: don't check size when the object is bad
  pack-objects: shrink z_delta_size field in struct object_entry
  pack-objects: refer to delta objects by index instead of pointer
  pack-objects: move in_pack out of struct object_entry
  pack-objects: move in_pack_pos out of struct object_entry
  pack-objects: use bitfield for object_entry::depth
  pack-objects: use bitfield for object_entry::dfs_state
  pack-objects: turn type and in_pack_type to bitfields
  pack-objects: a bit of document about struct object_entry
  read-cache.c: make $GIT_TEST_SPLIT_INDEX boolean
2018-05-23 14:38:19 +09:00
Junio C Hamano
fcb6df3254 Merge branch 'sb/oid-object-info'
The codepath around object-info API has been taught to take the
repository object (which in turn tells the API which object store
the objects are to be located).

* sb/oid-object-info:
  cache.h: allow oid_object_info to handle arbitrary repositories
  packfile: add repository argument to cache_or_unpack_entry
  packfile: add repository argument to unpack_entry
  packfile: add repository argument to read_object
  packfile: add repository argument to packed_object_info
  packfile: add repository argument to packed_to_object_type
  packfile: add repository argument to retry_bad_packed_offset
  cache.h: add repository argument to oid_object_info
  cache.h: add repository argument to oid_object_info_extended
2018-05-23 14:38:16 +09:00